Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.58■□□□□ 0.73
VTNP04004 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VTNP04004 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
VTNP04004 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VTNP04004 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VTNP04004 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VTNP04004 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
VTNP04004 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VTNP04004 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.58■□□□□ 0.72
VTNP04004 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.58■□□□□ 0.72
VTNP04004 AC093909.1-201ENST00000504731 1122 ntBASIC19.58■□□□□ 0.72
VTNP04004 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.58■□□□□ 0.72
VTNP04004 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
VTNP04004 NKAPP1-205ENST00000585790 367 ntBASIC19.58■□□□□ 0.72
VTNP04004 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
VTNP04004 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VTNP04004 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.58■□□□□ 0.72
VTNP04004 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
VTNP04004 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VTNP04004 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
VTNP04004 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VTNP04004 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
VTNP04004 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
VTNP04004 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VTNP04004 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
VTNP04004 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VTNP04004 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.57■□□□□ 0.72
VTNP04004 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
VTNP04004 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VTNP04004 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
VTNP04004 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
VTNP04004 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
VTNP04004 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VTNP04004 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VTNP04004 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
VTNP04004 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.57■□□□□ 0.72
VTNP04004 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
VTNP04004 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.57■□□□□ 0.72
VTNP04004 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
VTNP04004 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.57■□□□□ 0.72
VTNP04004 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.57■□□□□ 0.72
VTNP04004 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
VTNP04004 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.57■□□□□ 0.72
VTNP04004 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.57■□□□□ 0.72
VTNP04004 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.57■□□□□ 0.72
VTNP04004 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
VTNP04004 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VTNP04004 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.57■□□□□ 0.72
VTNP04004 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VTNP04004 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.57■□□□□ 0.72
VTNP04004 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VTNP04004 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VTNP04004 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
VTNP04004 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
VTNP04004 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
VTNP04004 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.56■□□□□ 0.72
VTNP04004 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
VTNP04004 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VTNP04004 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VTNP04004 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
VTNP04004 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
VTNP04004 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VTNP04004 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VTNP04004 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.56■□□□□ 0.72
VTNP04004 AC139887.3-201ENST00000568585 713 ntBASIC19.56■□□□□ 0.72
VTNP04004 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.56■□□□□ 0.72
VTNP04004 AC025062.2-201ENST00000605477 670 ntBASIC19.56■□□□□ 0.72
VTNP04004 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.56■□□□□ 0.72
VTNP04004 AC116407.3-201ENST00000623905 1129 ntBASIC19.56■□□□□ 0.72
VTNP04004 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
VTNP04004 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.56■□□□□ 0.72
VTNP04004 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
VTNP04004 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VTNP04004 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VTNP04004 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VTNP04004 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VTNP04004 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
VTNP04004 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
VTNP04004 AC020763.4-201ENST00000623414 4170 ntBASIC19.55■□□□□ 0.72
VTNP04004 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VTNP04004 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.55■□□□□ 0.72
VTNP04004 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
VTNP04004 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VTNP04004 SIRPAP1-201ENST00000448467 1770 ntBASIC19.55■□□□□ 0.72
VTNP04004 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VTNP04004 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VTNP04004 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VTNP04004 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
VTNP04004 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VTNP04004 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.55■□□□□ 0.72
VTNP04004 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.55■□□□□ 0.72
VTNP04004 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.55■□□□□ 0.72
VTNP04004 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
VTNP04004 AC122714.2-201ENST00000502787 707 ntBASIC19.55■□□□□ 0.72
VTNP04004 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.55■□□□□ 0.72
VTNP04004 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.55■□□□□ 0.72
VTNP04004 AL139288.1-201ENST00000623748 933 ntBASIC19.55■□□□□ 0.72
VTNP04004 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VTNP04004 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VTNP04004 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms