Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.53■□□□□ 0.24
NKX2-2O95096 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.53■□□□□ 0.24
NKX2-2O95096 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX2-2O95096 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX2-2O95096 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX2-2O95096 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NKX2-2O95096 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
NKX2-2O95096 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
NKX2-2O95096 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NKX2-2O95096 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.53■□□□□ 0.24
NKX2-2O95096 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NKX2-2O95096 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.53■□□□□ 0.24
NKX2-2O95096 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.53■□□□□ 0.24
NKX2-2O95096 AC087388.1-201ENST00000571370 1112 ntBASIC16.53■□□□□ 0.24
NKX2-2O95096 AC090616.6-201ENST00000582640 721 ntBASIC16.53■□□□□ 0.24
NKX2-2O95096 AL353801.3-201ENST00000609898 542 ntBASIC16.53■□□□□ 0.24
NKX2-2O95096 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
NKX2-2O95096 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.53■□□□□ 0.24
NKX2-2O95096 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
NKX2-2O95096 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.53■□□□□ 0.24
NKX2-2O95096 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX2-2O95096 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX2-2O95096 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
NKX2-2O95096 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.53■□□□□ 0.24
NKX2-2O95096 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.53■□□□□ 0.24
NKX2-2O95096 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NKX2-2O95096 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.53■□□□□ 0.24
NKX2-2O95096 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX2-2O95096 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.53■□□□□ 0.24
NKX2-2O95096 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX2-2O95096 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX2-2O95096 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.52■□□□□ 0.24
NKX2-2O95096 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.52■□□□□ 0.24
NKX2-2O95096 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
NKX2-2O95096 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NKX2-2O95096 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
NKX2-2O95096 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
NKX2-2O95096 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NKX2-2O95096 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NKX2-2O95096 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NKX2-2O95096 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NKX2-2O95096 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.52■□□□□ 0.24
NKX2-2O95096 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.52■□□□□ 0.24
NKX2-2O95096 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.52■□□□□ 0.24
NKX2-2O95096 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NKX2-2O95096 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NKX2-2O95096 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NKX2-2O95096 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NKX2-2O95096 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NKX2-2O95096 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.52■□□□□ 0.24
NKX2-2O95096 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.52■□□□□ 0.24
NKX2-2O95096 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NKX2-2O95096 AL592071.1-201ENST00000611956 408 ntBASIC16.52■□□□□ 0.24
NKX2-2O95096 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.52■□□□□ 0.24
NKX2-2O95096 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NKX2-2O95096 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NKX2-2O95096 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
NKX2-2O95096 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
NKX2-2O95096 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.52■□□□□ 0.23
NKX2-2O95096 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
NKX2-2O95096 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.52■□□□□ 0.23
NKX2-2O95096 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.23
NKX2-2O95096 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NKX2-2O95096 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
NKX2-2O95096 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NKX2-2O95096 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.51■□□□□ 0.23
NKX2-2O95096 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NKX2-2O95096 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.51■□□□□ 0.23
NKX2-2O95096 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.51■□□□□ 0.23
NKX2-2O95096 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NKX2-2O95096 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NKX2-2O95096 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NKX2-2O95096 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NKX2-2O95096 AC096633.1-201ENST00000422446 749 ntBASIC16.51■□□□□ 0.23
NKX2-2O95096 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.51■□□□□ 0.23
NKX2-2O95096 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NKX2-2O95096 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.51■□□□□ 0.23
NKX2-2O95096 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.51■□□□□ 0.23
NKX2-2O95096 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NKX2-2O95096 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.51■□□□□ 0.23
NKX2-2O95096 AL121672.3-201ENST00000608644 468 ntBASIC16.51■□□□□ 0.23
NKX2-2O95096 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
NKX2-2O95096 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
NKX2-2O95096 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
NKX2-2O95096 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NKX2-2O95096 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NKX2-2O95096 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.51■□□□□ 0.23
NKX2-2O95096 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.51■□□□□ 0.23
NKX2-2O95096 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NKX2-2O95096 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NKX2-2O95096 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.51■□□□□ 0.23
NKX2-2O95096 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NKX2-2O95096 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.51■□□□□ 0.23
NKX2-2O95096 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
NKX2-2O95096 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NKX2-2O95096 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.5■□□□□ 0.23
NKX2-2O95096 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
NKX2-2O95096 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX2-2O95096 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.5■□□□□ 0.23
NKX2-2O95096 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms