Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLSTN1O94985 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLSTN1O94985 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLSTN1O94985 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.86■□□□□ 0.77
CLSTN1O94985 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.86■□□□□ 0.77
CLSTN1O94985 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.86■□□□□ 0.77
CLSTN1O94985 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLSTN1O94985 AC104390.1-201ENST00000555663 520 ntBASIC19.86■□□□□ 0.77
CLSTN1O94985 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.86■□□□□ 0.77
CLSTN1O94985 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.86■□□□□ 0.77
CLSTN1O94985 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.86■□□□□ 0.77
CLSTN1O94985 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.86■□□□□ 0.77
CLSTN1O94985 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLSTN1O94985 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLSTN1O94985 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLSTN1O94985 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLSTN1O94985 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLSTN1O94985 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLSTN1O94985 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLSTN1O94985 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.85■□□□□ 0.77
CLSTN1O94985 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLSTN1O94985 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLSTN1O94985 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLSTN1O94985 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC19.85■□□□□ 0.77
CLSTN1O94985 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLSTN1O94985 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLSTN1O94985 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLSTN1O94985 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CLSTN1O94985 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLSTN1O94985 TSPY5P-201ENST00000426936 936 ntBASIC19.85■□□□□ 0.77
CLSTN1O94985 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.85■□□□□ 0.77
CLSTN1O94985 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLSTN1O94985 DUX4L26-201ENST00000489078 1255 ntBASIC19.85■□□□□ 0.77
CLSTN1O94985 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.85■□□□□ 0.77
CLSTN1O94985 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.85■□□□□ 0.77
CLSTN1O94985 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLSTN1O94985 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLSTN1O94985 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.85■□□□□ 0.77
CLSTN1O94985 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLSTN1O94985 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLSTN1O94985 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CLSTN1O94985 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLSTN1O94985 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC19.85■□□□□ 0.77
CLSTN1O94985 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CLSTN1O94985 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.85■□□□□ 0.77
CLSTN1O94985 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.85■□□□□ 0.77
CLSTN1O94985 AC009102.3-201ENST00000623118 1491 ntBASIC19.85■□□□□ 0.77
CLSTN1O94985 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLSTN1O94985 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLSTN1O94985 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLSTN1O94985 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLSTN1O94985 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLSTN1O94985 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CLSTN1O94985 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLSTN1O94985 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLSTN1O94985 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.84■□□□□ 0.77
CLSTN1O94985 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLSTN1O94985 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.84■□□□□ 0.77
CLSTN1O94985 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLSTN1O94985 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.84■□□□□ 0.77
CLSTN1O94985 AC104076.2-201ENST00000448912 469 ntBASIC19.84■□□□□ 0.77
CLSTN1O94985 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.84■□□□□ 0.77
CLSTN1O94985 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.84■□□□□ 0.77
CLSTN1O94985 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.84■□□□□ 0.77
CLSTN1O94985 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
CLSTN1O94985 AL163051.1-201ENST00000569214 1512 ntBASIC19.84■□□□□ 0.77
CLSTN1O94985 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.84■□□□□ 0.77
CLSTN1O94985 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLSTN1O94985 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLSTN1O94985 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CLSTN1O94985 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CLSTN1O94985 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.84■□□□□ 0.77
CLSTN1O94985 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLSTN1O94985 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLSTN1O94985 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLSTN1O94985 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLSTN1O94985 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.83■□□□□ 0.77
CLSTN1O94985 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLSTN1O94985 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLSTN1O94985 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.83■□□□□ 0.77
CLSTN1O94985 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLSTN1O94985 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLSTN1O94985 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CLSTN1O94985 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLSTN1O94985 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CLSTN1O94985 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLSTN1O94985 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.83■□□□□ 0.77
CLSTN1O94985 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
CLSTN1O94985 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLSTN1O94985 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.83■□□□□ 0.76
CLSTN1O94985 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.83■□□□□ 0.76
CLSTN1O94985 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLSTN1O94985 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
CLSTN1O94985 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.83■□□□□ 0.76
CLSTN1O94985 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLSTN1O94985 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLSTN1O94985 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLSTN1O94985 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLSTN1O94985 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.83■□□□□ 0.76
CLSTN1O94985 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms