Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.99■□□□□ 0.47
GPC4O75487 HOMER2P1-201ENST00000455653 964 ntBASIC17.99■□□□□ 0.47
GPC4O75487 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.99■□□□□ 0.47
GPC4O75487 AC063952.2-201ENST00000498792 1227 ntBASIC17.99■□□□□ 0.47
GPC4O75487 KRT18P21-201ENST00000515767 1272 ntBASIC17.99■□□□□ 0.47
GPC4O75487 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
GPC4O75487 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
GPC4O75487 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
GPC4O75487 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GPC4O75487 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GPC4O75487 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
GPC4O75487 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
GPC4O75487 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.99■□□□□ 0.47
GPC4O75487 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.99■□□□□ 0.47
GPC4O75487 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
GPC4O75487 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GPC4O75487 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.99■□□□□ 0.47
GPC4O75487 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.99■□□□□ 0.47
GPC4O75487 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GPC4O75487 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
GPC4O75487 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.98■□□□□ 0.47
GPC4O75487 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GPC4O75487 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
GPC4O75487 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GPC4O75487 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
GPC4O75487 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GPC4O75487 SPDYE15P-201ENST00000424157 909 ntBASIC17.98■□□□□ 0.47
GPC4O75487 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.98■□□□□ 0.47
GPC4O75487 SLC25A6P5-201ENST00000435663 894 ntBASIC17.98■□□□□ 0.47
GPC4O75487 DUX4L26-201ENST00000489078 1255 ntBASIC17.98■□□□□ 0.47
GPC4O75487 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
GPC4O75487 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GPC4O75487 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
GPC4O75487 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
GPC4O75487 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
GPC4O75487 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.98■□□□□ 0.47
GPC4O75487 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.98■□□□□ 0.47
GPC4O75487 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GPC4O75487 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GPC4O75487 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
GPC4O75487 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
GPC4O75487 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.98■□□□□ 0.47
GPC4O75487 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
GPC4O75487 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GPC4O75487 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GPC4O75487 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.97■□□□□ 0.47
GPC4O75487 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GPC4O75487 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
GPC4O75487 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GPC4O75487 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
GPC4O75487 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GPC4O75487 GMCL1P1-201ENST00000463439 1581 ntBASIC17.97■□□□□ 0.47
GPC4O75487 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GPC4O75487 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GPC4O75487 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GPC4O75487 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
GPC4O75487 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GPC4O75487 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GPC4O75487 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
GPC4O75487 FAM8A6P-201ENST00000407496 1135 ntBASIC17.97■□□□□ 0.47
GPC4O75487 KRT18P38-201ENST00000449496 1282 ntBASIC17.97■□□□□ 0.47
GPC4O75487 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GPC4O75487 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
GPC4O75487 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GPC4O75487 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.97■□□□□ 0.47
GPC4O75487 AC079602.3-201ENST00000623931 403 ntBASIC17.97■□□□□ 0.47
GPC4O75487 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GPC4O75487 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GPC4O75487 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.97■□□□□ 0.47
GPC4O75487 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GPC4O75487 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.97■□□□□ 0.47
GPC4O75487 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
GPC4O75487 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GPC4O75487 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.97■□□□□ 0.47
GPC4O75487 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.96■□□□□ 0.47
GPC4O75487 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
GPC4O75487 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GPC4O75487 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GPC4O75487 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GPC4O75487 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GPC4O75487 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GPC4O75487 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.96■□□□□ 0.47
GPC4O75487 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
GPC4O75487 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GPC4O75487 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GPC4O75487 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GPC4O75487 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.96■□□□□ 0.47
GPC4O75487 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.96■□□□□ 0.47
GPC4O75487 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.96■□□□□ 0.47
GPC4O75487 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GPC4O75487 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GPC4O75487 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
GPC4O75487 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.96■□□□□ 0.47
GPC4O75487 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
GPC4O75487 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
GPC4O75487 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
GPC4O75487 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GPC4O75487 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
GPC4O75487 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
GPC4O75487 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms