Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF253O75346 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF253O75346 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF253O75346 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC13.99□□□□□ -0.17
ZNF253O75346 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
ZNF253O75346 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
ZNF253O75346 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
ZNF253O75346 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF253O75346 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC13.99□□□□□ -0.17
ZNF253O75346 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF253O75346 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF253O75346 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF253O75346 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC13.99□□□□□ -0.17
ZNF253O75346 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF253O75346 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
ZNF253O75346 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF253O75346 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
ZNF253O75346 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF253O75346 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC13.99□□□□□ -0.17
ZNF253O75346 AC008040.2-201ENST00000461049 708 ntBASIC13.99□□□□□ -0.17
ZNF253O75346 CA15P1-201ENST00000481698 905 ntBASIC13.99□□□□□ -0.17
ZNF253O75346 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
ZNF253O75346 DGCR10-201ENST00000609839 495 ntBASIC13.99□□□□□ -0.17
ZNF253O75346 TBCB-214ENST00000629269 413 ntTSL 5 BASIC13.99□□□□□ -0.17
ZNF253O75346 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF253O75346 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF253O75346 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF253O75346 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF253O75346 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF253O75346 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF253O75346 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF253O75346 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF253O75346 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
ZNF253O75346 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF253O75346 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC13.99□□□□□ -0.17
ZNF253O75346 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF253O75346 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF253O75346 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
ZNF253O75346 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF253O75346 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
ZNF253O75346 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF253O75346 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
ZNF253O75346 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.99□□□□□ -0.17
ZNF253O75346 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF253O75346 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF253O75346 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF253O75346 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF253O75346 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF253O75346 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC13.98□□□□□ -0.17
ZNF253O75346 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.98□□□□□ -0.17
ZNF253O75346 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC13.98□□□□□ -0.17
ZNF253O75346 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC13.98□□□□□ -0.17
ZNF253O75346 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF253O75346 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF253O75346 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF253O75346 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC13.98□□□□□ -0.17
ZNF253O75346 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC13.98□□□□□ -0.17
ZNF253O75346 ID1-201ENST00000376105 1233 ntBASIC13.98□□□□□ -0.17
ZNF253O75346 AL023284.2-201ENST00000405850 579 ntBASIC13.98□□□□□ -0.17
ZNF253O75346 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC13.98□□□□□ -0.17
ZNF253O75346 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF253O75346 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF253O75346 RNF121-214ENST00000533380 870 ntTSL 3 BASIC13.98□□□□□ -0.17
ZNF253O75346 REXO1L9P-201ENST00000604264 2108 ntBASIC13.98□□□□□ -0.17
ZNF253O75346 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC13.98□□□□□ -0.17
ZNF253O75346 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF253O75346 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.98□□□□□ -0.17
ZNF253O75346 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF253O75346 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF253O75346 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF253O75346 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF253O75346 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.98□□□□□ -0.17
ZNF253O75346 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
ZNF253O75346 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
ZNF253O75346 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF253O75346 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ZNF253O75346 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
ZNF253O75346 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF253O75346 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC13.97□□□□□ -0.17
ZNF253O75346 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF253O75346 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ZNF253O75346 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF253O75346 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.97□□□□□ -0.17
ZNF253O75346 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC13.97□□□□□ -0.17
ZNF253O75346 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF253O75346 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
ZNF253O75346 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF253O75346 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ZNF253O75346 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ZNF253O75346 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.97□□□□□ -0.17
ZNF253O75346 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF253O75346 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF253O75346 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF253O75346 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
ZNF253O75346 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF253O75346 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.97□□□□□ -0.17
ZNF253O75346 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF253O75346 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF253O75346 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ZNF253O75346 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms