Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CPNE3O75131 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE3O75131 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.2■□□□□ 0.34
CPNE3O75131 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CPNE3O75131 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE3O75131 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE3O75131 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CPNE3O75131 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.2■□□□□ 0.34
CPNE3O75131 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CPNE3O75131 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE3O75131 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CPNE3O75131 AL138781.2-201ENST00000617896 1843 ntBASIC17.2■□□□□ 0.34
CPNE3O75131 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.2■□□□□ 0.34
CPNE3O75131 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE3O75131 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
CPNE3O75131 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.2■□□□□ 0.34
CPNE3O75131 KRT16P4-201ENST00000453883 522 ntBASIC17.2■□□□□ 0.34
CPNE3O75131 AC091607.1-201ENST00000490318 1060 ntBASIC17.2■□□□□ 0.34
CPNE3O75131 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.2■□□□□ 0.34
CPNE3O75131 AL353801.3-201ENST00000609898 542 ntBASIC17.2■□□□□ 0.34
CPNE3O75131 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.2■□□□□ 0.34
CPNE3O75131 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE3O75131 AL499627.1-201ENST00000569373 2188 ntBASIC17.2■□□□□ 0.34
CPNE3O75131 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CPNE3O75131 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE3O75131 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.2■□□□□ 0.34
CPNE3O75131 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE3O75131 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE3O75131 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE3O75131 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE3O75131 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.2■□□□□ 0.34
CPNE3O75131 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPNE3O75131 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE3O75131 CROCCP3-202ENST00000420820 1947 ntBASIC17.19■□□□□ 0.34
CPNE3O75131 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE3O75131 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE3O75131 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.19■□□□□ 0.34
CPNE3O75131 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.19■□□□□ 0.34
CPNE3O75131 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
CPNE3O75131 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE3O75131 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE3O75131 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE3O75131 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE3O75131 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
CPNE3O75131 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE3O75131 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE3O75131 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.19■□□□□ 0.34
CPNE3O75131 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE3O75131 POM121L3P-201ENST00000419331 1163 ntBASIC17.19■□□□□ 0.34
CPNE3O75131 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.19■□□□□ 0.34
CPNE3O75131 FDX1P1-201ENST00000449115 551 ntBASIC17.19■□□□□ 0.34
CPNE3O75131 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CPNE3O75131 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.19■□□□□ 0.34
CPNE3O75131 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
CPNE3O75131 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.19■□□□□ 0.34
CPNE3O75131 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.19■□□□□ 0.34
CPNE3O75131 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.19■□□□□ 0.34
CPNE3O75131 AL031008.1-201ENST00000619963 541 ntBASIC17.19■□□□□ 0.34
CPNE3O75131 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE3O75131 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.19■□□□□ 0.34
CPNE3O75131 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE3O75131 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.19■□□□□ 0.34
CPNE3O75131 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE3O75131 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE3O75131 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE3O75131 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPNE3O75131 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE3O75131 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.18■□□□□ 0.34
CPNE3O75131 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.18■□□□□ 0.34
CPNE3O75131 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE3O75131 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
CPNE3O75131 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.18■□□□□ 0.34
CPNE3O75131 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE3O75131 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.18■□□□□ 0.34
CPNE3O75131 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE3O75131 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE3O75131 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE3O75131 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CPNE3O75131 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE3O75131 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE3O75131 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CPNE3O75131 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.18■□□□□ 0.34
CPNE3O75131 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.18■□□□□ 0.34
CPNE3O75131 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE3O75131 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.18■□□□□ 0.34
CPNE3O75131 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CPNE3O75131 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE3O75131 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CPNE3O75131 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.18■□□□□ 0.34
CPNE3O75131 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
CPNE3O75131 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.18■□□□□ 0.34
CPNE3O75131 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.18■□□□□ 0.34
CPNE3O75131 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE3O75131 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.18■□□□□ 0.34
CPNE3O75131 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CPNE3O75131 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.18■□□□□ 0.34
CPNE3O75131 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE3O75131 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.18■□□□□ 0.34
CPNE3O75131 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CPNE3O75131 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms