Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TSPAN3O60637 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.45■□□□□ 0.54
TSPAN3O60637 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.45■□□□□ 0.54
TSPAN3O60637 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.45■□□□□ 0.54
TSPAN3O60637 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
TSPAN3O60637 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.45■□□□□ 0.54
TSPAN3O60637 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.45■□□□□ 0.54
TSPAN3O60637 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TSPAN3O60637 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TSPAN3O60637 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TSPAN3O60637 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TSPAN3O60637 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.45■□□□□ 0.54
TSPAN3O60637 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TSPAN3O60637 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TSPAN3O60637 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TSPAN3O60637 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TSPAN3O60637 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
TSPAN3O60637 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TSPAN3O60637 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TSPAN3O60637 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.44■□□□□ 0.54
TSPAN3O60637 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
TSPAN3O60637 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TSPAN3O60637 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TSPAN3O60637 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TSPAN3O60637 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TSPAN3O60637 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.44■□□□□ 0.54
TSPAN3O60637 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TSPAN3O60637 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.44■□□□□ 0.54
TSPAN3O60637 AKR1C7P-201ENST00000305623 895 ntBASIC18.44■□□□□ 0.54
TSPAN3O60637 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TSPAN3O60637 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.44■□□□□ 0.54
TSPAN3O60637 AC079781.3-201ENST00000449110 356 ntBASIC18.44■□□□□ 0.54
TSPAN3O60637 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TSPAN3O60637 AC114341.1-201ENST00000618070 349 ntBASIC18.44■□□□□ 0.54
TSPAN3O60637 AL031008.1-201ENST00000619963 541 ntBASIC18.44■□□□□ 0.54
TSPAN3O60637 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.44■□□□□ 0.54
TSPAN3O60637 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TSPAN3O60637 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TSPAN3O60637 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.44■□□□□ 0.54
TSPAN3O60637 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TSPAN3O60637 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TSPAN3O60637 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.44■□□□□ 0.54
TSPAN3O60637 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TSPAN3O60637 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TSPAN3O60637 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TSPAN3O60637 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.44■□□□□ 0.54
TSPAN3O60637 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TSPAN3O60637 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TSPAN3O60637 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.44■□□□□ 0.54
TSPAN3O60637 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
TSPAN3O60637 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TSPAN3O60637 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TSPAN3O60637 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TSPAN3O60637 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TSPAN3O60637 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TSPAN3O60637 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.43■□□□□ 0.54
TSPAN3O60637 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.43■□□□□ 0.54
TSPAN3O60637 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TSPAN3O60637 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.43■□□□□ 0.54
TSPAN3O60637 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TSPAN3O60637 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
TSPAN3O60637 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TSPAN3O60637 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TSPAN3O60637 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.43■□□□□ 0.54
TSPAN3O60637 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.43■□□□□ 0.54
TSPAN3O60637 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TSPAN3O60637 FAAHP1-202ENST00000446499 1238 ntBASIC18.43■□□□□ 0.54
TSPAN3O60637 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TSPAN3O60637 AC132008.2-207ENST00000454517 770 ntBASIC18.43■□□□□ 0.54
TSPAN3O60637 AC009533.2-201ENST00000543664 586 ntBASIC18.43■□□□□ 0.54
TSPAN3O60637 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.43■□□□□ 0.54
TSPAN3O60637 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TSPAN3O60637 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
TSPAN3O60637 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.43■□□□□ 0.54
TSPAN3O60637 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.43■□□□□ 0.54
TSPAN3O60637 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.43■□□□□ 0.54
TSPAN3O60637 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TSPAN3O60637 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.43■□□□□ 0.54
TSPAN3O60637 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TSPAN3O60637 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TSPAN3O60637 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TSPAN3O60637 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
TSPAN3O60637 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TSPAN3O60637 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TSPAN3O60637 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TSPAN3O60637 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TSPAN3O60637 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TSPAN3O60637 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TSPAN3O60637 KRT8P47-201ENST00000604727 1398 ntBASIC18.42■□□□□ 0.54
TSPAN3O60637 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TSPAN3O60637 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.42■□□□□ 0.54
TSPAN3O60637 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN3O60637 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TSPAN3O60637 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN3O60637 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN3O60637 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TSPAN3O60637 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TSPAN3O60637 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.42■□□□□ 0.54
TSPAN3O60637 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.42■□□□□ 0.54
TSPAN3O60637 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms