Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RIPK2O43353 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RIPK2O43353 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
RIPK2O43353 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RIPK2O43353 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.19■□□□□ 0.5
RIPK2O43353 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RIPK2O43353 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RIPK2O43353 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RIPK2O43353 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.19■□□□□ 0.5
RIPK2O43353 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RIPK2O43353 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.19■□□□□ 0.5
RIPK2O43353 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RIPK2O43353 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RIPK2O43353 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.19■□□□□ 0.5
RIPK2O43353 NUDT16P1-203ENST00000513809 620 ntBASIC18.19■□□□□ 0.5
RIPK2O43353 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RIPK2O43353 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RIPK2O43353 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.19■□□□□ 0.5
RIPK2O43353 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.19■□□□□ 0.5
RIPK2O43353 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RIPK2O43353 AC112497.1-201ENST00000624824 639 ntBASIC18.19■□□□□ 0.5
RIPK2O43353 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.19■□□□□ 0.5
RIPK2O43353 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RIPK2O43353 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
RIPK2O43353 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RIPK2O43353 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RIPK2O43353 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
RIPK2O43353 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RIPK2O43353 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RIPK2O43353 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RIPK2O43353 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RIPK2O43353 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.18■□□□□ 0.5
RIPK2O43353 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RIPK2O43353 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RIPK2O43353 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RIPK2O43353 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RIPK2O43353 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RIPK2O43353 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RIPK2O43353 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RIPK2O43353 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RIPK2O43353 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.18■□□□□ 0.5
RIPK2O43353 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RIPK2O43353 LINC00167-201ENST00000530583 1419 ntBASIC18.18■□□□□ 0.5
RIPK2O43353 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.18■□□□□ 0.5
RIPK2O43353 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RIPK2O43353 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RIPK2O43353 MIR935-201ENST00000401179 91 ntBASIC18.18■□□□□ 0.5
RIPK2O43353 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.18■□□□□ 0.5
RIPK2O43353 CRYGFP-201ENST00000418459 633 ntBASIC18.18■□□□□ 0.5
RIPK2O43353 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.18■□□□□ 0.5
RIPK2O43353 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
RIPK2O43353 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.18■□□□□ 0.5
RIPK2O43353 AP003041.3-201ENST00000527151 707 ntBASIC18.18■□□□□ 0.5
RIPK2O43353 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RIPK2O43353 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.18■□□□□ 0.5
RIPK2O43353 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.18■□□□□ 0.5
RIPK2O43353 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.18■□□□□ 0.5
RIPK2O43353 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.18■□□□□ 0.5
RIPK2O43353 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
RIPK2O43353 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
RIPK2O43353 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RIPK2O43353 AC009949.1-201ENST00000623048 1830 ntBASIC18.18■□□□□ 0.5
RIPK2O43353 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RIPK2O43353 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RIPK2O43353 PCDHB19P-201ENST00000570871 2371 ntBASIC18.18■□□□□ 0.5
RIPK2O43353 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.18■□□□□ 0.5
RIPK2O43353 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.18■□□□□ 0.5
RIPK2O43353 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RIPK2O43353 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RIPK2O43353 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.18■□□□□ 0.5
RIPK2O43353 AC105020.1-201ENST00000435356 2205 ntBASIC18.18■□□□□ 0.5
RIPK2O43353 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RIPK2O43353 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RIPK2O43353 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
RIPK2O43353 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
RIPK2O43353 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RIPK2O43353 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RIPK2O43353 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RIPK2O43353 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
RIPK2O43353 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RIPK2O43353 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RIPK2O43353 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RIPK2O43353 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RIPK2O43353 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.17■□□□□ 0.5
RIPK2O43353 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RIPK2O43353 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
RIPK2O43353 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RIPK2O43353 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.17■□□□□ 0.5
RIPK2O43353 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.17■□□□□ 0.5
RIPK2O43353 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.17■□□□□ 0.5
RIPK2O43353 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.17■□□□□ 0.5
RIPK2O43353 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.17■□□□□ 0.5
RIPK2O43353 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.17■□□□□ 0.5
RIPK2O43353 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.17■□□□□ 0.5
RIPK2O43353 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.17■□□□□ 0.5
RIPK2O43353 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.17■□□□□ 0.5
RIPK2O43353 AL023803.3-201ENST00000615559 522 ntBASIC18.17■□□□□ 0.5
RIPK2O43353 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RIPK2O43353 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RIPK2O43353 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms