Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MSI1O43347 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MSI1O43347 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MSI1O43347 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
MSI1O43347 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
MSI1O43347 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MSI1O43347 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
MSI1O43347 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MSI1O43347 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MSI1O43347 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
MSI1O43347 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
MSI1O43347 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MSI1O43347 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
MSI1O43347 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MSI1O43347 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
MSI1O43347 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
MSI1O43347 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MSI1O43347 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.59■□□□□ 0.57
MSI1O43347 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MSI1O43347 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.59■□□□□ 0.57
MSI1O43347 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.59■□□□□ 0.57
MSI1O43347 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
MSI1O43347 AC022898.2-201ENST00000616822 1312 ntBASIC18.59■□□□□ 0.57
MSI1O43347 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
MSI1O43347 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.59■□□□□ 0.57
MSI1O43347 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.59■□□□□ 0.57
MSI1O43347 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MSI1O43347 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MSI1O43347 TSPY19P-201ENST00000418461 509 ntBASIC18.59■□□□□ 0.57
MSI1O43347 TSPY18P-201ENST00000441642 509 ntBASIC18.59■□□□□ 0.57
MSI1O43347 KRT18P31-201ENST00000506277 1292 ntBASIC18.59■□□□□ 0.57
MSI1O43347 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MSI1O43347 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MSI1O43347 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.59■□□□□ 0.57
MSI1O43347 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.59■□□□□ 0.57
MSI1O43347 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
MSI1O43347 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.59■□□□□ 0.57
MSI1O43347 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MSI1O43347 AC007613.1-201ENST00000572811 2597 ntBASIC18.59■□□□□ 0.57
MSI1O43347 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
MSI1O43347 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MSI1O43347 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MSI1O43347 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
MSI1O43347 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MSI1O43347 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MSI1O43347 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.58■□□□□ 0.57
MSI1O43347 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.58■□□□□ 0.57
MSI1O43347 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MSI1O43347 AC138028.4-201ENST00000564984 1845 ntBASIC18.58■□□□□ 0.57
MSI1O43347 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.58■□□□□ 0.57
MSI1O43347 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.57
MSI1O43347 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.58■□□□□ 0.57
MSI1O43347 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
MSI1O43347 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
MSI1O43347 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
MSI1O43347 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MSI1O43347 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
MSI1O43347 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
MSI1O43347 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
MSI1O43347 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.58■□□□□ 0.56
MSI1O43347 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MSI1O43347 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.58■□□□□ 0.56
MSI1O43347 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.58■□□□□ 0.56
MSI1O43347 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.58■□□□□ 0.56
MSI1O43347 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MSI1O43347 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.58■□□□□ 0.56
MSI1O43347 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.58■□□□□ 0.56
MSI1O43347 AL121894.2-201ENST00000602977 491 ntBASIC18.58■□□□□ 0.56
MSI1O43347 IFNL4P1-201ENST00000607083 540 ntBASIC18.58■□□□□ 0.56
MSI1O43347 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MSI1O43347 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MSI1O43347 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MSI1O43347 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MSI1O43347 TP73-AS1-210ENST00000637775 1455 ntBASIC18.58■□□□□ 0.56
MSI1O43347 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MSI1O43347 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
MSI1O43347 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MSI1O43347 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MSI1O43347 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MSI1O43347 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MSI1O43347 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
MSI1O43347 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.57■□□□□ 0.56
MSI1O43347 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MSI1O43347 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MSI1O43347 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MSI1O43347 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
MSI1O43347 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MSI1O43347 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MSI1O43347 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.57■□□□□ 0.56
MSI1O43347 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.57■□□□□ 0.56
MSI1O43347 AL121772.3-201ENST00000610840 674 ntBASIC18.57■□□□□ 0.56
MSI1O43347 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.57■□□□□ 0.56
MSI1O43347 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MSI1O43347 FLJ13224-201ENST00000313737 1514 ntBASIC18.57■□□□□ 0.56
MSI1O43347 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.57■□□□□ 0.56
MSI1O43347 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MSI1O43347 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.57■□□□□ 0.56
MSI1O43347 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MSI1O43347 AL390961.4-201ENST00000623958 2535 ntBASIC18.57■□□□□ 0.56
MSI1O43347 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms