Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.8■□□□□ 0.28
RRP8O43159 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.8■□□□□ 0.28
RRP8O43159 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RRP8O43159 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RRP8O43159 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.8■□□□□ 0.28
RRP8O43159 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RRP8O43159 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RRP8O43159 ELL2P1-201ENST00000413990 1906 ntBASIC16.8■□□□□ 0.28
RRP8O43159 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.8■□□□□ 0.28
RRP8O43159 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RRP8O43159 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.8■□□□□ 0.28
RRP8O43159 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RRP8O43159 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
RRP8O43159 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RRP8O43159 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RRP8O43159 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.79■□□□□ 0.28
RRP8O43159 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.79■□□□□ 0.28
RRP8O43159 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RRP8O43159 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.79■□□□□ 0.28
RRP8O43159 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RRP8O43159 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RRP8O43159 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RRP8O43159 HEIH-201ENST00000623091 1652 ntBASIC16.79■□□□□ 0.28
RRP8O43159 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.79■□□□□ 0.28
RRP8O43159 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RRP8O43159 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RRP8O43159 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.79■□□□□ 0.28
RRP8O43159 KRT18P27-201ENST00000427733 1299 ntBASIC16.79■□□□□ 0.28
RRP8O43159 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.79■□□□□ 0.28
RRP8O43159 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.79■□□□□ 0.28
RRP8O43159 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.79■□□□□ 0.28
RRP8O43159 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RRP8O43159 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RRP8O43159 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.79■□□□□ 0.28
RRP8O43159 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RRP8O43159 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.79■□□□□ 0.28
RRP8O43159 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RRP8O43159 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RRP8O43159 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RRP8O43159 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RRP8O43159 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RRP8O43159 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RRP8O43159 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RRP8O43159 AC079776.2-201ENST00000641154 1609 ntBASIC16.78■□□□□ 0.28
RRP8O43159 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.78■□□□□ 0.28
RRP8O43159 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RRP8O43159 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.78■□□□□ 0.28
RRP8O43159 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RRP8O43159 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RRP8O43159 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.78■□□□□ 0.28
RRP8O43159 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RRP8O43159 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.78■□□□□ 0.28
RRP8O43159 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RRP8O43159 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.78■□□□□ 0.28
RRP8O43159 KRT18P65-201ENST00000439811 1286 ntBASIC16.78■□□□□ 0.28
RRP8O43159 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.78■□□□□ 0.28
RRP8O43159 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.78■□□□□ 0.28
RRP8O43159 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RRP8O43159 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RRP8O43159 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.78■□□□□ 0.28
RRP8O43159 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RRP8O43159 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RRP8O43159 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RRP8O43159 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.78■□□□□ 0.28
RRP8O43159 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RRP8O43159 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.77■□□□□ 0.28
RRP8O43159 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RRP8O43159 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RRP8O43159 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RRP8O43159 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RRP8O43159 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RRP8O43159 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RRP8O43159 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RRP8O43159 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RRP8O43159 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RRP8O43159 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.77■□□□□ 0.28
RRP8O43159 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.77■□□□□ 0.28
RRP8O43159 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RRP8O43159 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RRP8O43159 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RRP8O43159 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.77■□□□□ 0.28
RRP8O43159 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.77■□□□□ 0.28
RRP8O43159 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RRP8O43159 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.77■□□□□ 0.28
RRP8O43159 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
RRP8O43159 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.77■□□□□ 0.28
RRP8O43159 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.77■□□□□ 0.28
RRP8O43159 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.77■□□□□ 0.28
RRP8O43159 AL096865.1-201ENST00000606796 927 ntBASIC16.77■□□□□ 0.28
RRP8O43159 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RRP8O43159 LINC00602-201ENST00000629776 2065 ntBASIC16.77■□□□□ 0.27
RRP8O43159 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RRP8O43159 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RRP8O43159 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RRP8O43159 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
RRP8O43159 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RRP8O43159 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
RRP8O43159 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RRP8O43159 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
RRP8O43159 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms