Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC24.7■■□□□ 1.55
CHD2O14647 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC24.7■■□□□ 1.55
CHD2O14647 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
CHD2O14647 AF228730.6-201ENST00000641497 218 ntBASIC24.7■■□□□ 1.55
CHD2O14647 AC084121.3-201ENST00000641716 218 ntBASIC24.7■■□□□ 1.55
CHD2O14647 AC105233.6-201ENST00000642093 218 ntBASIC24.7■■□□□ 1.55
CHD2O14647 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CHD2O14647 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CHD2O14647 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CHD2O14647 BAD-202ENST00000394531 631 ntTSL 3 BASIC24.7■■□□□ 1.54
CHD2O14647 METTL26-204ENST00000397665 558 ntTSL 2 BASIC24.7■■□□□ 1.54
CHD2O14647 TAF8-206ENST00000472818 719 ntTSL 2 BASIC24.7■■□□□ 1.54
CHD2O14647 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CHD2O14647 STK19B-204ENST00000512515 211 ntBASIC24.7■■□□□ 1.54
CHD2O14647 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC24.7■■□□□ 1.54
CHD2O14647 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC24.7■■□□□ 1.54
CHD2O14647 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC24.7■■□□□ 1.54
CHD2O14647 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC24.7■■□□□ 1.54
CHD2O14647 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CHD2O14647 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
CHD2O14647 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
CHD2O14647 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CHD2O14647 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
CHD2O14647 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CHD2O14647 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC24.69■■□□□ 1.54
CHD2O14647 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC24.69■■□□□ 1.54
CHD2O14647 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC24.69■■□□□ 1.54
CHD2O14647 PTCHD3P3-201ENST00000403073 906 ntBASIC24.69■■□□□ 1.54
CHD2O14647 ACTG1P4-201ENST00000425123 1122 ntBASIC24.69■■□□□ 1.54
CHD2O14647 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CHD2O14647 AC025678.2-201ENST00000562061 970 ntBASIC24.69■■□□□ 1.54
CHD2O14647 AC051619.7-201ENST00000568314 623 ntBASIC24.69■■□□□ 1.54
CHD2O14647 AC109462.3-201ENST00000573934 613 ntBASIC24.69■■□□□ 1.54
CHD2O14647 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC24.69■■□□□ 1.54
CHD2O14647 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC24.69■■□□□ 1.54
CHD2O14647 AC009336.1-201ENST00000608941 1553 ntBASIC24.69■■□□□ 1.54
CHD2O14647 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CHD2O14647 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC24.69■■□□□ 1.54
CHD2O14647 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
CHD2O14647 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHD2O14647 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
CHD2O14647 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHD2O14647 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC24.68■■□□□ 1.54
CHD2O14647 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC24.68■■□□□ 1.54
CHD2O14647 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC24.68■■□□□ 1.54
CHD2O14647 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHD2O14647 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC24.68■■□□□ 1.54
CHD2O14647 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHD2O14647 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHD2O14647 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHD2O14647 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHD2O14647 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC24.68■■□□□ 1.54
CHD2O14647 AC015922.1-201ENST00000421102 1152 ntBASIC24.68■■□□□ 1.54
CHD2O14647 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHD2O14647 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
CHD2O14647 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC24.68■■□□□ 1.54
CHD2O14647 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHD2O14647 YTHDF3-AS1-201ENST00000603538 718 ntBASIC24.68■■□□□ 1.54
CHD2O14647 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC24.68■■□□□ 1.54
CHD2O14647 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC24.68■■□□□ 1.54
CHD2O14647 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHD2O14647 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
CHD2O14647 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHD2O14647 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CHD2O14647 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHD2O14647 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CHD2O14647 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC24.68■■□□□ 1.54
CHD2O14647 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC24.68■■□□□ 1.54
CHD2O14647 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC24.68■■□□□ 1.54
CHD2O14647 CXCL1P1-201ENST00000502804 216 ntBASIC24.68■■□□□ 1.54
CHD2O14647 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CHD2O14647 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
CHD2O14647 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC24.67■■□□□ 1.54
CHD2O14647 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CHD2O14647 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CHD2O14647 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC24.67■■□□□ 1.54
CHD2O14647 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC24.67■■□□□ 1.54
CHD2O14647 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CHD2O14647 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CHD2O14647 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CHD2O14647 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC24.67■■□□□ 1.54
CHD2O14647 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CHD2O14647 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC24.67■■□□□ 1.54
CHD2O14647 AC012645.4-201ENST00000610691 1061 ntBASIC24.67■■□□□ 1.54
CHD2O14647 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CHD2O14647 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
CHD2O14647 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC24.67■■□□□ 1.54
CHD2O14647 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CHD2O14647 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CHD2O14647 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CHD2O14647 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC24.66■■□□□ 1.54
CHD2O14647 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC24.66■■□□□ 1.54
CHD2O14647 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
CHD2O14647 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CHD2O14647 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
CHD2O14647 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC24.66■■□□□ 1.54
CHD2O14647 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CHD2O14647 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC24.66■■□□□ 1.54
CHD2O14647 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CHD2O14647 NMU-203ENST00000507338 658 ntTSL 3 BASIC24.66■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms