Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
HFM1A2PYH4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC26.38■■□□□ 1.81
HFM1A2PYH4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
HFM1A2PYH4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
HFM1A2PYH4 MED22-202ENST00000371999 987 ntTSL 3 BASIC26.38■■□□□ 1.81
HFM1A2PYH4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC26.38■■□□□ 1.81
HFM1A2PYH4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC26.38■■□□□ 1.81
HFM1A2PYH4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC26.38■■□□□ 1.81
HFM1A2PYH4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC26.38■■□□□ 1.81
HFM1A2PYH4 SLC25A6P5-201ENST00000435663 894 ntBASIC26.38■■□□□ 1.81
HFM1A2PYH4 FAM197Y8-203ENST00000450145 560 ntBASIC26.38■■□□□ 1.81
HFM1A2PYH4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC26.38■■□□□ 1.81
HFM1A2PYH4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC26.38■■□□□ 1.81
HFM1A2PYH4 AC021087.4-201ENST00000563761 564 ntBASIC26.38■■□□□ 1.81
HFM1A2PYH4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC26.38■■□□□ 1.81
HFM1A2PYH4 FUT8-AS1-201ENST00000621019 1521 ntBASIC26.38■■□□□ 1.81
HFM1A2PYH4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
HFM1A2PYH4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC26.38■■□□□ 1.81
HFM1A2PYH4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
HFM1A2PYH4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
HFM1A2PYH4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC26.37■■□□□ 1.81
HFM1A2PYH4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
HFM1A2PYH4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
HFM1A2PYH4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
HFM1A2PYH4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
HFM1A2PYH4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
HFM1A2PYH4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
HFM1A2PYH4 HIST2H3DP1-201ENST00000401004 416 ntBASIC26.37■■□□□ 1.81
HFM1A2PYH4 HNRNPDP1-201ENST00000439535 754 ntBASIC26.37■■□□□ 1.81
HFM1A2PYH4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC26.37■■□□□ 1.81
HFM1A2PYH4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
HFM1A2PYH4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC26.37■■□□□ 1.81
HFM1A2PYH4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC26.37■■□□□ 1.81
HFM1A2PYH4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
HFM1A2PYH4 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
HFM1A2PYH4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC26.37■■□□□ 1.81
HFM1A2PYH4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC26.37■■□□□ 1.81
HFM1A2PYH4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC26.36■■□□□ 1.81
HFM1A2PYH4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
HFM1A2PYH4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC26.36■■□□□ 1.81
HFM1A2PYH4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
HFM1A2PYH4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC26.36■■□□□ 1.81
HFM1A2PYH4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
HFM1A2PYH4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC26.36■■□□□ 1.81
HFM1A2PYH4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC26.36■■□□□ 1.81
HFM1A2PYH4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC26.36■■□□□ 1.81
HFM1A2PYH4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC26.36■■□□□ 1.81
HFM1A2PYH4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
HFM1A2PYH4 AL022342.1-201ENST00000400363 863 ntBASIC26.36■■□□□ 1.81
HFM1A2PYH4 SCARNA2-201ENST00000458748 420 ntBASIC26.36■■□□□ 1.81
HFM1A2PYH4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC26.36■■□□□ 1.81
HFM1A2PYH4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC26.36■■□□□ 1.81
HFM1A2PYH4 AC073592.5-201ENST00000624854 528 ntBASIC26.36■■□□□ 1.81
HFM1A2PYH4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC26.36■■□□□ 1.81
HFM1A2PYH4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
HFM1A2PYH4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
HFM1A2PYH4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
HFM1A2PYH4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
HFM1A2PYH4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC26.35■■□□□ 1.81
HFM1A2PYH4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC26.35■■□□□ 1.81
HFM1A2PYH4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
HFM1A2PYH4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC26.35■■□□□ 1.81
HFM1A2PYH4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
HFM1A2PYH4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
HFM1A2PYH4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
HFM1A2PYH4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
HFM1A2PYH4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
HFM1A2PYH4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC26.35■■□□□ 1.81
HFM1A2PYH4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC26.35■■□□□ 1.81
HFM1A2PYH4 STK25P1-201ENST00000585406 838 ntBASIC26.35■■□□□ 1.81
HFM1A2PYH4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
HFM1A2PYH4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC26.35■■□□□ 1.81
HFM1A2PYH4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
HFM1A2PYH4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
HFM1A2PYH4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
HFM1A2PYH4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC26.35■■□□□ 1.81
HFM1A2PYH4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
HFM1A2PYH4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
HFM1A2PYH4 NOC2LP1-202ENST00000452600 2235 ntBASIC26.34■■□□□ 1.81
HFM1A2PYH4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
HFM1A2PYH4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
HFM1A2PYH4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
HFM1A2PYH4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
HFM1A2PYH4 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
HFM1A2PYH4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC26.34■■□□□ 1.81
HFM1A2PYH4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
HFM1A2PYH4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC26.34■■□□□ 1.81
HFM1A2PYH4 NEFHP1-201ENST00000412845 2629 ntBASIC26.34■■□□□ 1.81
HFM1A2PYH4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
HFM1A2PYH4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC26.34■■□□□ 1.81
HFM1A2PYH4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
HFM1A2PYH4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC26.34■■□□□ 1.81
HFM1A2PYH4 AL390961.4-201ENST00000623958 2535 ntBASIC26.34■■□□□ 1.81
HFM1A2PYH4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC26.34■■□□□ 1.81
HFM1A2PYH4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
HFM1A2PYH4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC26.33■■□□□ 1.81
HFM1A2PYH4 LINC00304-203ENST00000565008 1864 ntBASIC26.33■■□□□ 1.81
HFM1A2PYH4 KLF4P1-201ENST00000412782 1185 ntBASIC26.33■■□□□ 1.81
HFM1A2PYH4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
HFM1A2PYH4 AC073648.2-201ENST00000510116 352 ntBASIC26.33■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms