Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHISA3A0PJX4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
SHISA3A0PJX4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHISA3A0PJX4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHISA3A0PJX4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.62■□□□□ 0.09
SHISA3A0PJX4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SHISA3A0PJX4 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
SHISA3A0PJX4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
SHISA3A0PJX4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHISA3A0PJX4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHISA3A0PJX4 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHISA3A0PJX4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHISA3A0PJX4 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.62■□□□□ 0.09
SHISA3A0PJX4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHISA3A0PJX4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.62■□□□□ 0.09
SHISA3A0PJX4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHISA3A0PJX4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.62■□□□□ 0.09
SHISA3A0PJX4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SHISA3A0PJX4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.62■□□□□ 0.09
SHISA3A0PJX4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
SHISA3A0PJX4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHISA3A0PJX4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SHISA3A0PJX4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHISA3A0PJX4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.62■□□□□ 0.09
SHISA3A0PJX4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC15.62■□□□□ 0.09
SHISA3A0PJX4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SHISA3A0PJX4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.62■□□□□ 0.09
SHISA3A0PJX4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHISA3A0PJX4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
SHISA3A0PJX4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHISA3A0PJX4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHISA3A0PJX4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHISA3A0PJX4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
SHISA3A0PJX4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SHISA3A0PJX4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
SHISA3A0PJX4 AC005915.1-201ENST00000624912 2018 ntBASIC15.61■□□□□ 0.09
SHISA3A0PJX4 AC009949.1-201ENST00000623048 1830 ntBASIC15.61■□□□□ 0.09
SHISA3A0PJX4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.61■□□□□ 0.09
SHISA3A0PJX4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.61■□□□□ 0.09
SHISA3A0PJX4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHISA3A0PJX4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHISA3A0PJX4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.61■□□□□ 0.09
SHISA3A0PJX4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHISA3A0PJX4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.61■□□□□ 0.09
SHISA3A0PJX4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHISA3A0PJX4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.61■□□□□ 0.09
SHISA3A0PJX4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.61■□□□□ 0.09
SHISA3A0PJX4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHISA3A0PJX4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHISA3A0PJX4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHISA3A0PJX4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.61■□□□□ 0.09
SHISA3A0PJX4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
SHISA3A0PJX4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC15.61■□□□□ 0.09
SHISA3A0PJX4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.61■□□□□ 0.09
SHISA3A0PJX4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHISA3A0PJX4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
SHISA3A0PJX4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SHISA3A0PJX4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SHISA3A0PJX4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.61■□□□□ 0.09
SHISA3A0PJX4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
SHISA3A0PJX4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.61■□□□□ 0.09
SHISA3A0PJX4 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHISA3A0PJX4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.61■□□□□ 0.09
SHISA3A0PJX4 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
SHISA3A0PJX4 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.61■□□□□ 0.09
SHISA3A0PJX4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHISA3A0PJX4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHISA3A0PJX4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
SHISA3A0PJX4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.61■□□□□ 0.09
SHISA3A0PJX4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.6■□□□□ 0.09
SHISA3A0PJX4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.6■□□□□ 0.09
SHISA3A0PJX4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.6■□□□□ 0.09
SHISA3A0PJX4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.6■□□□□ 0.09
SHISA3A0PJX4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
SHISA3A0PJX4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SHISA3A0PJX4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.6■□□□□ 0.09
SHISA3A0PJX4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.6■□□□□ 0.09
SHISA3A0PJX4 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SHISA3A0PJX4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.6■□□□□ 0.09
SHISA3A0PJX4 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SHISA3A0PJX4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC15.6■□□□□ 0.09
SHISA3A0PJX4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SHISA3A0PJX4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC15.6■□□□□ 0.09
SHISA3A0PJX4 AL391005.1-201ENST00000623953 2435 ntBASIC15.6■□□□□ 0.09
SHISA3A0PJX4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SHISA3A0PJX4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SHISA3A0PJX4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.6■□□□□ 0.09
SHISA3A0PJX4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SHISA3A0PJX4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SHISA3A0PJX4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC15.6■□□□□ 0.09
SHISA3A0PJX4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.6■□□□□ 0.09
SHISA3A0PJX4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SHISA3A0PJX4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SHISA3A0PJX4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SHISA3A0PJX4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SHISA3A0PJX4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
SHISA3A0PJX4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.6■□□□□ 0.09
SHISA3A0PJX4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SHISA3A0PJX4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SHISA3A0PJX4 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms