Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC163A0A0D9SF12 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC163A0A0D9SF12 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC163A0A0D9SF12 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC163A0A0D9SF12 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.64■□□□□ 0.41
CCDC163A0A0D9SF12 AP000344.2-201ENST00000512987 629 ntBASIC17.64■□□□□ 0.41
CCDC163A0A0D9SF12 DUTP2-201ENST00000519164 463 ntBASIC17.64■□□□□ 0.41
CCDC163A0A0D9SF12 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC163A0A0D9SF12 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.64■□□□□ 0.41
CCDC163A0A0D9SF12 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC163A0A0D9SF12 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC163A0A0D9SF12 AC096734.2-201ENST00000562054 433 ntBASIC17.64■□□□□ 0.41
CCDC163A0A0D9SF12 AC018845.2-201ENST00000568326 409 ntBASIC17.64■□□□□ 0.41
CCDC163A0A0D9SF12 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC163A0A0D9SF12 AL805961.1-202ENST00000641562 540 ntBASIC17.64■□□□□ 0.41
CCDC163A0A0D9SF12 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC163A0A0D9SF12 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC163A0A0D9SF12 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CCDC163A0A0D9SF12 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC163A0A0D9SF12 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CCDC163A0A0D9SF12 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC163A0A0D9SF12 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC163A0A0D9SF12 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC163A0A0D9SF12 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CCDC163A0A0D9SF12 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC163A0A0D9SF12 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
CCDC163A0A0D9SF12 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC163A0A0D9SF12 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC163A0A0D9SF12 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC163A0A0D9SF12 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC163A0A0D9SF12 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC163A0A0D9SF12 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CCDC163A0A0D9SF12 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC163A0A0D9SF12 AC003669.1-201ENST00000334569 611 ntBASIC17.63■□□□□ 0.41
CCDC163A0A0D9SF12 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC163A0A0D9SF12 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC163A0A0D9SF12 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC163A0A0D9SF12 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC163A0A0D9SF12 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC163A0A0D9SF12 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC163A0A0D9SF12 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC163A0A0D9SF12 AL078644.1-201ENST00000609881 752 ntBASIC17.63■□□□□ 0.41
CCDC163A0A0D9SF12 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC163A0A0D9SF12 AC004790.2-201ENST00000623588 572 ntBASIC17.63■□□□□ 0.41
CCDC163A0A0D9SF12 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC163A0A0D9SF12 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC163A0A0D9SF12 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC163A0A0D9SF12 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC163A0A0D9SF12 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC163A0A0D9SF12 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC163A0A0D9SF12 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC163A0A0D9SF12 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC163A0A0D9SF12 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCDC163A0A0D9SF12 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC163A0A0D9SF12 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CCDC163A0A0D9SF12 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC163A0A0D9SF12 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC163A0A0D9SF12 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 AL049757.1-201ENST00000616842 1596 ntBASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 AC007952.6-201ENST00000573168 2673 ntBASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 AC003957.1-201ENST00000625108 2673 ntBASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 MRPL20P1-201ENST00000400819 433 ntBASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC163A0A0D9SF12 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms