Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.33■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.33■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 AC007613.1-201ENST00000572811 2597 ntBASIC16.33■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 KRT18P55-202ENST00000578578 1546 ntBASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 MIR3180-1-201ENST00000580374 94 ntBASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 MIR3180-3-201ENST00000584616 94 ntBASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.31■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms