Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 AC006538.3-201ENST00000612495 578 ntBASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 FAM215A-202ENST00000632077 792 ntBASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 AL138781.2-201ENST00000617896 1843 ntBASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CSNK1G3Q9Y6M4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CSNK1G3Q9Y6M4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CSNK1G3Q9Y6M4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CSNK1G3Q9Y6M4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CSNK1G3Q9Y6M4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
CSNK1G3Q9Y6M4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CSNK1G3Q9Y6M4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CSNK1G3Q9Y6M4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CSNK1G3Q9Y6M4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
CSNK1G3Q9Y6M4 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.52■□□□□ 0.4
CSNK1G3Q9Y6M4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.52■□□□□ 0.4
CSNK1G3Q9Y6M4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.52■□□□□ 0.4
CSNK1G3Q9Y6M4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.52■□□□□ 0.4
CSNK1G3Q9Y6M4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CSNK1G3Q9Y6M4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CSNK1G3Q9Y6M4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.52■□□□□ 0.4
CSNK1G3Q9Y6M4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CSNK1G3Q9Y6M4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
CSNK1G3Q9Y6M4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.52■□□□□ 0.4
CSNK1G3Q9Y6M4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CSNK1G3Q9Y6M4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CSNK1G3Q9Y6M4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CSNK1G3Q9Y6M4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CSNK1G3Q9Y6M4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.52■□□□□ 0.39
CSNK1G3Q9Y6M4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 KRT18P58-201ENST00000527480 1120 ntBASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 AC106730.1-201ENST00000566722 1090 ntBASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 AC243591.1-201ENST00000452967 1364 ntBASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.51■□□□□ 0.39
CSNK1G3Q9Y6M4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1G3Q9Y6M4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1G3Q9Y6M4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1G3Q9Y6M4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.5■□□□□ 0.39
CSNK1G3Q9Y6M4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1G3Q9Y6M4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1G3Q9Y6M4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1G3Q9Y6M4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CSNK1G3Q9Y6M4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
CSNK1G3Q9Y6M4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.5■□□□□ 0.39
CSNK1G3Q9Y6M4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.5■□□□□ 0.39
CSNK1G3Q9Y6M4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.5■□□□□ 0.39
CSNK1G3Q9Y6M4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CSNK1G3Q9Y6M4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1G3Q9Y6M4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1G3Q9Y6M4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms