Protein–RNA interactions for Protein: Q9Y5Q8

GTF3C5, General transcription factor 3C polypeptide 5, humanhuman

Predicted RBP Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5Q9Y5Q8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GTF3C5Q9Y5Q8 FLJ13224-201ENST00000313737 1514 ntBASIC19.2■□□□□ 0.66
GTF3C5Q9Y5Q8 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GTF3C5Q9Y5Q8 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 COX5BP2-201ENST00000392354 334 ntBASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 AC026396.1-201ENST00000419388 421 ntBASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
GTF3C5Q9Y5Q8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 AC007967.3-201ENST00000434308 558 ntBASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 ABCD1P5-201ENST00000445663 754 ntBASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 EMBP1-201ENST00000458200 901 ntBASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 SCARNA2-201ENST00000458748 420 ntBASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 KRT8P47-201ENST00000604727 1398 ntBASIC19.18■□□□□ 0.66
GTF3C5Q9Y5Q8 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GTF3C5Q9Y5Q8 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GTF3C5Q9Y5Q8 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.17■□□□□ 0.66
GTF3C5Q9Y5Q8 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GTF3C5Q9Y5Q8 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
GTF3C5Q9Y5Q8 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
GTF3C5Q9Y5Q8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.17■□□□□ 0.66
GTF3C5Q9Y5Q8 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
GTF3C5Q9Y5Q8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.17■□□□□ 0.66
GTF3C5Q9Y5Q8 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GTF3C5Q9Y5Q8 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GTF3C5Q9Y5Q8 AKR1C7P-201ENST00000305623 895 ntBASIC19.17■□□□□ 0.66
GTF3C5Q9Y5Q8 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.17■□□□□ 0.66
GTF3C5Q9Y5Q8 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
GTF3C5Q9Y5Q8 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.17■□□□□ 0.66
GTF3C5Q9Y5Q8 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
GTF3C5Q9Y5Q8 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GTF3C5Q9Y5Q8 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms