Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTDP1Q9Y5B0 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTDP1Q9Y5B0 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTDP1Q9Y5B0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.71■□□□□ 0.91
CTDP1Q9Y5B0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CTDP1Q9Y5B0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CTDP1Q9Y5B0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTDP1Q9Y5B0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CTDP1Q9Y5B0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTDP1Q9Y5B0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CTDP1Q9Y5B0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
CTDP1Q9Y5B0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CTDP1Q9Y5B0 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTDP1Q9Y5B0 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTDP1Q9Y5B0 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTDP1Q9Y5B0 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTDP1Q9Y5B0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTDP1Q9Y5B0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CTDP1Q9Y5B0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTDP1Q9Y5B0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTDP1Q9Y5B0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTDP1Q9Y5B0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTDP1Q9Y5B0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTDP1Q9Y5B0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.7■□□□□ 0.9
CTDP1Q9Y5B0 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CTDP1Q9Y5B0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTDP1Q9Y5B0 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTDP1Q9Y5B0 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTDP1Q9Y5B0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.7■□□□□ 0.9
CTDP1Q9Y5B0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.7■□□□□ 0.9
CTDP1Q9Y5B0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CTDP1Q9Y5B0 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CTDP1Q9Y5B0 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.7■□□□□ 0.9
CTDP1Q9Y5B0 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTDP1Q9Y5B0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
CTDP1Q9Y5B0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTDP1Q9Y5B0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CTDP1Q9Y5B0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CTDP1Q9Y5B0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.69■□□□□ 0.9
CTDP1Q9Y5B0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTDP1Q9Y5B0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.69■□□□□ 0.9
CTDP1Q9Y5B0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CTDP1Q9Y5B0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CTDP1Q9Y5B0 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.69■□□□□ 0.9
CTDP1Q9Y5B0 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTDP1Q9Y5B0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTDP1Q9Y5B0 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.69■□□□□ 0.9
CTDP1Q9Y5B0 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.69■□□□□ 0.9
CTDP1Q9Y5B0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CTDP1Q9Y5B0 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTDP1Q9Y5B0 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.69■□□□□ 0.9
CTDP1Q9Y5B0 AP001269.4-201ENST00000609611 512 ntBASIC20.69■□□□□ 0.9
CTDP1Q9Y5B0 BX640515.1-201ENST00000617215 977 ntBASIC20.69■□□□□ 0.9
CTDP1Q9Y5B0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTDP1Q9Y5B0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTDP1Q9Y5B0 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTDP1Q9Y5B0 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.69■□□□□ 0.9
CTDP1Q9Y5B0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTDP1Q9Y5B0 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CTDP1Q9Y5B0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CTDP1Q9Y5B0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CTDP1Q9Y5B0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTDP1Q9Y5B0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.69■□□□□ 0.9
CTDP1Q9Y5B0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.69■□□□□ 0.9
CTDP1Q9Y5B0 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CTDP1Q9Y5B0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CTDP1Q9Y5B0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTDP1Q9Y5B0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTDP1Q9Y5B0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTDP1Q9Y5B0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTDP1Q9Y5B0 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTDP1Q9Y5B0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.68■□□□□ 0.9
CTDP1Q9Y5B0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTDP1Q9Y5B0 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CTDP1Q9Y5B0 RPS2P28-201ENST00000314255 741 ntBASIC20.68■□□□□ 0.9
CTDP1Q9Y5B0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTDP1Q9Y5B0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTDP1Q9Y5B0 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.68■□□□□ 0.9
CTDP1Q9Y5B0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.68■□□□□ 0.9
CTDP1Q9Y5B0 RNPS1P1-201ENST00000507437 918 ntBASIC20.68■□□□□ 0.9
CTDP1Q9Y5B0 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.68■□□□□ 0.9
CTDP1Q9Y5B0 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.68■□□□□ 0.9
CTDP1Q9Y5B0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTDP1Q9Y5B0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTDP1Q9Y5B0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.68■□□□□ 0.9
CTDP1Q9Y5B0 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CTDP1Q9Y5B0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CTDP1Q9Y5B0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CTDP1Q9Y5B0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTDP1Q9Y5B0 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTDP1Q9Y5B0 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTDP1Q9Y5B0 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTDP1Q9Y5B0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.67■□□□□ 0.9
CTDP1Q9Y5B0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CTDP1Q9Y5B0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTDP1Q9Y5B0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CTDP1Q9Y5B0 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.67■□□□□ 0.9
CTDP1Q9Y5B0 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CTDP1Q9Y5B0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTDP1Q9Y5B0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms