Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AL445675.2-201ENST00000620291 557 ntBASIC16.98■□□□□ 0.31
AP4S1Q9Y587 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
AP4S1Q9Y587 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP4S1Q9Y587 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP4S1Q9Y587 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
AP4S1Q9Y587 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
AP4S1Q9Y587 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.98■□□□□ 0.31
AP4S1Q9Y587 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP4S1Q9Y587 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.98■□□□□ 0.31
AP4S1Q9Y587 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP4S1Q9Y587 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.98■□□□□ 0.31
AP4S1Q9Y587 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.98■□□□□ 0.31
AP4S1Q9Y587 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.97■□□□□ 0.31
AP4S1Q9Y587 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4S1Q9Y587 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP4S1Q9Y587 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4S1Q9Y587 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.97■□□□□ 0.31
AP4S1Q9Y587 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP4S1Q9Y587 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4S1Q9Y587 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4S1Q9Y587 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP4S1Q9Y587 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4S1Q9Y587 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
AP4S1Q9Y587 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
AP4S1Q9Y587 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4S1Q9Y587 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP4S1Q9Y587 POM121L13P-201ENST00000422362 380 ntBASIC16.97■□□□□ 0.31
AP4S1Q9Y587 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.97■□□□□ 0.31
AP4S1Q9Y587 AC083906.2-201ENST00000511578 360 ntBASIC16.97■□□□□ 0.31
AP4S1Q9Y587 CKBP1-201ENST00000565489 1086 ntBASIC16.97■□□□□ 0.31
AP4S1Q9Y587 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.97■□□□□ 0.31
AP4S1Q9Y587 MIR4758-201ENST00000577688 71 ntBASIC16.97■□□□□ 0.31
AP4S1Q9Y587 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
AP4S1Q9Y587 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.97■□□□□ 0.31
AP4S1Q9Y587 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.97■□□□□ 0.31
AP4S1Q9Y587 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4S1Q9Y587 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4S1Q9Y587 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.97■□□□□ 0.31
AP4S1Q9Y587 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP4S1Q9Y587 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.97■□□□□ 0.31
AP4S1Q9Y587 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
AP4S1Q9Y587 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
AP4S1Q9Y587 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.97■□□□□ 0.31
AP4S1Q9Y587 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4S1Q9Y587 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4S1Q9Y587 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
AP4S1Q9Y587 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP4S1Q9Y587 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP4S1Q9Y587 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP4S1Q9Y587 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.96■□□□□ 0.31
AP4S1Q9Y587 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP4S1Q9Y587 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
AP4S1Q9Y587 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.96■□□□□ 0.31
AP4S1Q9Y587 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP4S1Q9Y587 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.96■□□□□ 0.31
AP4S1Q9Y587 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
AP4S1Q9Y587 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
AP4S1Q9Y587 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP4S1Q9Y587 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.96■□□□□ 0.31
AP4S1Q9Y587 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.96■□□□□ 0.31
AP4S1Q9Y587 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
AP4S1Q9Y587 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.96■□□□□ 0.31
AP4S1Q9Y587 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.96■□□□□ 0.31
AP4S1Q9Y587 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.96■□□□□ 0.31
AP4S1Q9Y587 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP4S1Q9Y587 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.96■□□□□ 0.31
AP4S1Q9Y587 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.96■□□□□ 0.31
AP4S1Q9Y587 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP4S1Q9Y587 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.96■□□□□ 0.31
AP4S1Q9Y587 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.96■□□□□ 0.31
AP4S1Q9Y587 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
AP4S1Q9Y587 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP4S1Q9Y587 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP4S1Q9Y587 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP4S1Q9Y587 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP4S1Q9Y587 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP4S1Q9Y587 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.96■□□□□ 0.31
AP4S1Q9Y587 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
AP4S1Q9Y587 DOC2GP-204ENST00000639052 2548 ntBASIC16.96■□□□□ 0.3
AP4S1Q9Y587 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
AP4S1Q9Y587 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
AP4S1Q9Y587 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
AP4S1Q9Y587 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
AP4S1Q9Y587 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
AP4S1Q9Y587 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
AP4S1Q9Y587 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
AP4S1Q9Y587 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.95■□□□□ 0.3
AP4S1Q9Y587 AC004980.1-204ENST00000429707 299 ntBASIC16.95■□□□□ 0.3
AP4S1Q9Y587 CDCA4P2-201ENST00000441182 718 ntBASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms