Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF11Q9Y3C5 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF11Q9Y3C5 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF11Q9Y3C5 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF11Q9Y3C5 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF11Q9Y3C5 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF11Q9Y3C5 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RNF11Q9Y3C5 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF11Q9Y3C5 PVRIG2P-201ENST00000435460 978 ntBASIC17.51■□□□□ 0.39
RNF11Q9Y3C5 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF11Q9Y3C5 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF11Q9Y3C5 AC010203.1-204ENST00000548782 407 ntBASIC17.51■□□□□ 0.39
RNF11Q9Y3C5 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.51■□□□□ 0.39
RNF11Q9Y3C5 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.51■□□□□ 0.39
RNF11Q9Y3C5 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF11Q9Y3C5 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF11Q9Y3C5 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
RNF11Q9Y3C5 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF11Q9Y3C5 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF11Q9Y3C5 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF11Q9Y3C5 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF11Q9Y3C5 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF11Q9Y3C5 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF11Q9Y3C5 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF11Q9Y3C5 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF11Q9Y3C5 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF11Q9Y3C5 KRT18P55-202ENST00000578578 1546 ntBASIC17.51■□□□□ 0.39
RNF11Q9Y3C5 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF11Q9Y3C5 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF11Q9Y3C5 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF11Q9Y3C5 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF11Q9Y3C5 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.51■□□□□ 0.39
RNF11Q9Y3C5 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF11Q9Y3C5 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.49■□□□□ 0.39
RNF11Q9Y3C5 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF11Q9Y3C5 AC006116.8-202ENST00000587620 1550 ntBASIC17.49■□□□□ 0.39
RNF11Q9Y3C5 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF11Q9Y3C5 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF11Q9Y3C5 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.49■□□□□ 0.39
RNF11Q9Y3C5 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF11Q9Y3C5 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF11Q9Y3C5 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
RNF11Q9Y3C5 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF11Q9Y3C5 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.49■□□□□ 0.39
RNF11Q9Y3C5 AC133561.5-201ENST00000635547 218 ntBASIC17.49■□□□□ 0.39
RNF11Q9Y3C5 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF11Q9Y3C5 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF11Q9Y3C5 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF11Q9Y3C5 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF11Q9Y3C5 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF11Q9Y3C5 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF11Q9Y3C5 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.49■□□□□ 0.39
RNF11Q9Y3C5 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RNF11Q9Y3C5 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF11Q9Y3C5 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF11Q9Y3C5 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.49■□□□□ 0.39
RNF11Q9Y3C5 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RNF11Q9Y3C5 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF11Q9Y3C5 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF11Q9Y3C5 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF11Q9Y3C5 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF11Q9Y3C5 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF11Q9Y3C5 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RNF11Q9Y3C5 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF11Q9Y3C5 AD000864.1-201ENST00000624076 2295 ntBASIC17.48■□□□□ 0.39
RNF11Q9Y3C5 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms