Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 AP001258.2-201ENST00000529891 490 ntBASIC7.27□□□□□ -1.25
MACF1Q9UPN3 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 AC026954.1-201ENST00000429771 1293 ntBASIC7.27□□□□□ -1.25
MACF1Q9UPN3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 MTCL1P1-201ENST00000446207 792 ntBASIC7.27□□□□□ -1.25
MACF1Q9UPN3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 RN7SL769P-201ENST00000469386 295 ntBASIC7.27□□□□□ -1.25
MACF1Q9UPN3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 AC099336.1-201ENST00000417053 1171 ntBASIC7.27□□□□□ -1.25
MACF1Q9UPN3 AC007967.3-201ENST00000434308 558 ntBASIC7.27□□□□□ -1.25
MACF1Q9UPN3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 PFN1P12-201ENST00000455938 534 ntBASIC7.27□□□□□ -1.25
MACF1Q9UPN3 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 AC006116.8-202ENST00000587620 1550 ntBASIC7.27□□□□□ -1.25
MACF1Q9UPN3 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 AC009154.2-201ENST00000621177 724 ntBASIC7.27□□□□□ -1.25
MACF1Q9UPN3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
MACF1Q9UPN3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 PTK2-225ENST00000520892 571 ntTSL 4 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 AC121338.2-201ENST00000622535 1744 ntBASIC7.26□□□□□ -1.25
MACF1Q9UPN3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 FO681548.1-201ENST00000455617 1132 ntBASIC7.26□□□□□ -1.25
MACF1Q9UPN3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 LINC01225-203ENST00000563550 1244 ntBASIC7.26□□□□□ -1.25
MACF1Q9UPN3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 NCF1C-201ENST00000438382 1427 ntBASIC7.26□□□□□ -1.25
MACF1Q9UPN3 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 NEU3-202ENST00000526068 431 ntTSL 2 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 RPS24-214ENST00000613865 538 ntTSL 5 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
MACF1Q9UPN3 AGER-203ENST00000375065 665 ntTSL 2 BASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms