Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.28■□□□□ 0.84
HDAC6Q9UBN7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HDAC6Q9UBN7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HDAC6Q9UBN7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HDAC6Q9UBN7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HDAC6Q9UBN7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HDAC6Q9UBN7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HDAC6Q9UBN7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.27■□□□□ 0.84
HDAC6Q9UBN7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
HDAC6Q9UBN7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.27■□□□□ 0.84
HDAC6Q9UBN7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HDAC6Q9UBN7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HDAC6Q9UBN7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
HDAC6Q9UBN7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HDAC6Q9UBN7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HDAC6Q9UBN7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HDAC6Q9UBN7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HDAC6Q9UBN7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HDAC6Q9UBN7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.27■□□□□ 0.84
HDAC6Q9UBN7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.27■□□□□ 0.84
HDAC6Q9UBN7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
HDAC6Q9UBN7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.27■□□□□ 0.84
HDAC6Q9UBN7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
HDAC6Q9UBN7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HDAC6Q9UBN7 TP73-AS1-207ENST00000624167 988 ntBASIC20.27■□□□□ 0.84
HDAC6Q9UBN7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HDAC6Q9UBN7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HDAC6Q9UBN7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HDAC6Q9UBN7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HDAC6Q9UBN7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.27■□□□□ 0.84
HDAC6Q9UBN7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HDAC6Q9UBN7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.27■□□□□ 0.84
HDAC6Q9UBN7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
HDAC6Q9UBN7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HDAC6Q9UBN7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
HDAC6Q9UBN7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HDAC6Q9UBN7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
HDAC6Q9UBN7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HDAC6Q9UBN7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.27■□□□□ 0.84
HDAC6Q9UBN7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
HDAC6Q9UBN7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HDAC6Q9UBN7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.27■□□□□ 0.83
HDAC6Q9UBN7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HDAC6Q9UBN7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.26■□□□□ 0.83
HDAC6Q9UBN7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
HDAC6Q9UBN7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HDAC6Q9UBN7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.26■□□□□ 0.83
HDAC6Q9UBN7 AC009102.3-201ENST00000623118 1491 ntBASIC20.26■□□□□ 0.83
HDAC6Q9UBN7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HDAC6Q9UBN7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HDAC6Q9UBN7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.26■□□□□ 0.83
HDAC6Q9UBN7 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
HDAC6Q9UBN7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.26■□□□□ 0.83
HDAC6Q9UBN7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.26■□□□□ 0.83
HDAC6Q9UBN7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HDAC6Q9UBN7 MIR5100-201ENST00000579544 119 ntBASIC20.26■□□□□ 0.83
HDAC6Q9UBN7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HDAC6Q9UBN7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
HDAC6Q9UBN7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HDAC6Q9UBN7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HDAC6Q9UBN7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
HDAC6Q9UBN7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.26■□□□□ 0.83
HDAC6Q9UBN7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
HDAC6Q9UBN7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HDAC6Q9UBN7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HDAC6Q9UBN7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
HDAC6Q9UBN7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HDAC6Q9UBN7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HDAC6Q9UBN7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HDAC6Q9UBN7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
HDAC6Q9UBN7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HDAC6Q9UBN7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HDAC6Q9UBN7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HDAC6Q9UBN7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HDAC6Q9UBN7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HDAC6Q9UBN7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HDAC6Q9UBN7 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.25■□□□□ 0.83
HDAC6Q9UBN7 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.25■□□□□ 0.83
HDAC6Q9UBN7 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.25■□□□□ 0.83
HDAC6Q9UBN7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
HDAC6Q9UBN7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.25■□□□□ 0.83
HDAC6Q9UBN7 AL591684.3-201ENST00000605187 298 ntBASIC20.25■□□□□ 0.83
HDAC6Q9UBN7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HDAC6Q9UBN7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
HDAC6Q9UBN7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
HDAC6Q9UBN7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.25■□□□□ 0.83
HDAC6Q9UBN7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HDAC6Q9UBN7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HDAC6Q9UBN7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
HDAC6Q9UBN7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HDAC6Q9UBN7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.25■□□□□ 0.83
HDAC6Q9UBN7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HDAC6Q9UBN7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HDAC6Q9UBN7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HDAC6Q9UBN7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HDAC6Q9UBN7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HDAC6Q9UBN7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
HDAC6Q9UBN7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HDAC6Q9UBN7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.24■□□□□ 0.83
HDAC6Q9UBN7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms