Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 MIR574-201ENST00000385209 96 ntBASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 PMS2P1-201ENST00000431037 1228 ntBASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 SLC25A1P1-201ENST00000528351 927 ntBASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 MIR7706-201ENST00000613747 67 ntBASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 AC023511.2-201ENST00000618803 211 ntBASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
LRIT1Q9P2V4 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 AL138781.2-201ENST00000617896 1843 ntBASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 HCG11-201ENST00000411553 5696 ntBASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 AC138932.1-201ENST00000534164 6830 ntBASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 AL671883.3-201ENST00000603274 991 ntBASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 AC093010.1-201ENST00000473625 1624 ntBASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRIT1Q9P2V4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRIT1Q9P2V4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRIT1Q9P2V4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
LRIT1Q9P2V4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LRIT1Q9P2V4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRIT1Q9P2V4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRIT1Q9P2V4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRIT1Q9P2V4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.27■□□□□ 0.36
LRIT1Q9P2V4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.27■□□□□ 0.36
LRIT1Q9P2V4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRIT1Q9P2V4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRIT1Q9P2V4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRIT1Q9P2V4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.27■□□□□ 0.36
LRIT1Q9P2V4 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRIT1Q9P2V4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.27■□□□□ 0.36
LRIT1Q9P2V4 AC116407.3-201ENST00000623905 1129 ntBASIC17.27■□□□□ 0.36
LRIT1Q9P2V4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRIT1Q9P2V4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRIT1Q9P2V4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRIT1Q9P2V4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRIT1Q9P2V4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms