Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.64■□□□□ 0.26
HPF1Q9NWY4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
HPF1Q9NWY4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPF1Q9NWY4 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
HPF1Q9NWY4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPF1Q9NWY4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HPF1Q9NWY4 LINC00167-201ENST00000530583 1419 ntBASIC16.64■□□□□ 0.25
HPF1Q9NWY4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HPF1Q9NWY4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HPF1Q9NWY4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
HPF1Q9NWY4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HPF1Q9NWY4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
HPF1Q9NWY4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HPF1Q9NWY4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.64■□□□□ 0.25
HPF1Q9NWY4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HPF1Q9NWY4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPF1Q9NWY4 NUS1P1-201ENST00000446295 882 ntBASIC16.64■□□□□ 0.25
HPF1Q9NWY4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HPF1Q9NWY4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.64■□□□□ 0.25
HPF1Q9NWY4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HPF1Q9NWY4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.64■□□□□ 0.25
HPF1Q9NWY4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HPF1Q9NWY4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HPF1Q9NWY4 AL691432.3-201ENST00000621860 400 ntBASIC16.64■□□□□ 0.25
HPF1Q9NWY4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPF1Q9NWY4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.64■□□□□ 0.25
HPF1Q9NWY4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPF1Q9NWY4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HPF1Q9NWY4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPF1Q9NWY4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HPF1Q9NWY4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPF1Q9NWY4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPF1Q9NWY4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HPF1Q9NWY4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HPF1Q9NWY4 ESPNP-201ENST00000270691 2015 ntBASIC16.63■□□□□ 0.25
HPF1Q9NWY4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 AC246785.2-201ENST00000432512 513 ntBASIC16.63■□□□□ 0.25
HPF1Q9NWY4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.63■□□□□ 0.25
HPF1Q9NWY4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 WIZP1-201ENST00000531444 2299 ntBASIC16.62■□□□□ 0.25
HPF1Q9NWY4 AP000997.3-201ENST00000623333 2250 ntBASIC16.62■□□□□ 0.25
HPF1Q9NWY4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 KRT17P6-201ENST00000453795 1220 ntBASIC16.62■□□□□ 0.25
HPF1Q9NWY4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 AC009154.2-201ENST00000621177 724 ntBASIC16.62■□□□□ 0.25
HPF1Q9NWY4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPF1Q9NWY4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms