Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SPTLC3Q9NUV7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SPTLC3Q9NUV7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SPTLC3Q9NUV7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 KRT8P50-201ENST00000562022 1438 ntBASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 AC093010.1-201ENST00000473625 1624 ntBASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPTLC3Q9NUV7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.75■□□□□ 0.75
SPTLC3Q9NUV7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.75■□□□□ 0.75
SPTLC3Q9NUV7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
SPTLC3Q9NUV7 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SPTLC3Q9NUV7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SPTLC3Q9NUV7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SPTLC3Q9NUV7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.75■□□□□ 0.75
SPTLC3Q9NUV7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SPTLC3Q9NUV7 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SPTLC3Q9NUV7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SPTLC3Q9NUV7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SPTLC3Q9NUV7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.75■□□□□ 0.75
SPTLC3Q9NUV7 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.75■□□□□ 0.75
SPTLC3Q9NUV7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.75■□□□□ 0.75
SPTLC3Q9NUV7 RARRES2P10-201ENST00000564312 460 ntBASIC19.75■□□□□ 0.75
SPTLC3Q9NUV7 AP000692.2-201ENST00000608391 879 ntBASIC19.75■□□□□ 0.75
SPTLC3Q9NUV7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.75■□□□□ 0.75
SPTLC3Q9NUV7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.75■□□□□ 0.75
SPTLC3Q9NUV7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
SPTLC3Q9NUV7 HCG11-201ENST00000411553 5696 ntBASIC19.75■□□□□ 0.75
SPTLC3Q9NUV7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SPTLC3Q9NUV7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.75■□□□□ 0.75
SPTLC3Q9NUV7 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SPTLC3Q9NUV7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SPTLC3Q9NUV7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SPTLC3Q9NUV7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SPTLC3Q9NUV7 AC026691.1-201ENST00000602502 2017 ntBASIC19.75■□□□□ 0.75
SPTLC3Q9NUV7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SPTLC3Q9NUV7 AL603756.1-201ENST00000606511 2163 ntBASIC19.74■□□□□ 0.75
SPTLC3Q9NUV7 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPTLC3Q9NUV7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SPTLC3Q9NUV7 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.74■□□□□ 0.75
SPTLC3Q9NUV7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SPTLC3Q9NUV7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SPTLC3Q9NUV7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.74■□□□□ 0.75
SPTLC3Q9NUV7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPTLC3Q9NUV7 MCCD1P1-208ENST00000445732 328 ntBASIC19.74■□□□□ 0.75
SPTLC3Q9NUV7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SPTLC3Q9NUV7 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.74■□□□□ 0.75
SPTLC3Q9NUV7 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SPTLC3Q9NUV7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPTLC3Q9NUV7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SPTLC3Q9NUV7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.74■□□□□ 0.75
SPTLC3Q9NUV7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPTLC3Q9NUV7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPTLC3Q9NUV7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.74■□□□□ 0.75
SPTLC3Q9NUV7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPTLC3Q9NUV7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SPTLC3Q9NUV7 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SPTLC3Q9NUV7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SPTLC3Q9NUV7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPTLC3Q9NUV7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.74■□□□□ 0.75
SPTLC3Q9NUV7 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SPTLC3Q9NUV7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPTLC3Q9NUV7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.73■□□□□ 0.75
SPTLC3Q9NUV7 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SPTLC3Q9NUV7 PCDHB17P-201ENST00000539533 2393 ntBASIC19.73■□□□□ 0.75
SPTLC3Q9NUV7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SPTLC3Q9NUV7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms