Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC52A3Q9NQ40 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SLC52A3Q9NQ40 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC52A3Q9NQ40 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
SLC52A3Q9NQ40 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.97■□□□□ 0.31
SLC52A3Q9NQ40 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC52A3Q9NQ40 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SLC52A3Q9NQ40 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
SLC52A3Q9NQ40 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
SLC52A3Q9NQ40 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC52A3Q9NQ40 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC52A3Q9NQ40 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC52A3Q9NQ40 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC52A3Q9NQ40 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC52A3Q9NQ40 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.96■□□□□ 0.31
SLC52A3Q9NQ40 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.96■□□□□ 0.31
SLC52A3Q9NQ40 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC52A3Q9NQ40 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC52A3Q9NQ40 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
SLC52A3Q9NQ40 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC52A3Q9NQ40 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC52A3Q9NQ40 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC52A3Q9NQ40 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SLC52A3Q9NQ40 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC52A3Q9NQ40 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.96■□□□□ 0.31
SLC52A3Q9NQ40 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.96■□□□□ 0.31
SLC52A3Q9NQ40 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.96■□□□□ 0.31
SLC52A3Q9NQ40 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
SLC52A3Q9NQ40 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
SLC52A3Q9NQ40 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
SLC52A3Q9NQ40 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.96■□□□□ 0.31
SLC52A3Q9NQ40 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC52A3Q9NQ40 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC52A3Q9NQ40 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC52A3Q9NQ40 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.96■□□□□ 0.31
SLC52A3Q9NQ40 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC52A3Q9NQ40 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC52A3Q9NQ40 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC52A3Q9NQ40 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC52A3Q9NQ40 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SLC52A3Q9NQ40 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.96■□□□□ 0.3
SLC52A3Q9NQ40 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
SLC52A3Q9NQ40 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SLC52A3Q9NQ40 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SLC52A3Q9NQ40 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SLC52A3Q9NQ40 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SLC52A3Q9NQ40 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
SLC52A3Q9NQ40 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC52A3Q9NQ40 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SLC52A3Q9NQ40 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC52A3Q9NQ40 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SLC52A3Q9NQ40 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.95■□□□□ 0.3
SLC52A3Q9NQ40 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SLC52A3Q9NQ40 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC52A3Q9NQ40 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC52A3Q9NQ40 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.95■□□□□ 0.3
SLC52A3Q9NQ40 MIR1238-201ENST00000408483 83 ntBASIC16.95■□□□□ 0.3
SLC52A3Q9NQ40 TSPY7P-201ENST00000431358 1114 ntBASIC16.95■□□□□ 0.3
SLC52A3Q9NQ40 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.95■□□□□ 0.3
SLC52A3Q9NQ40 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC52A3Q9NQ40 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC52A3Q9NQ40 EGLN1P1-201ENST00000531623 762 ntBASIC16.95■□□□□ 0.3
SLC52A3Q9NQ40 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.95■□□□□ 0.3
SLC52A3Q9NQ40 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
SLC52A3Q9NQ40 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
SLC52A3Q9NQ40 AC116407.2-201ENST00000613639 860 ntBASIC16.95■□□□□ 0.3
SLC52A3Q9NQ40 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC52A3Q9NQ40 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC52A3Q9NQ40 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC52A3Q9NQ40 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.95■□□□□ 0.3
SLC52A3Q9NQ40 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC52A3Q9NQ40 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC52A3Q9NQ40 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
SLC52A3Q9NQ40 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC52A3Q9NQ40 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SLC52A3Q9NQ40 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC52A3Q9NQ40 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
SLC52A3Q9NQ40 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC52A3Q9NQ40 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms