Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 AC104390.1-201ENST00000555663 520 ntBASIC20.03■□□□□ 0.8
CBX8Q9HC52 CD177P1-201ENST00000606252 935 ntBASIC20.03■□□□□ 0.8
CBX8Q9HC52 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.03■□□□□ 0.8
CBX8Q9HC52 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CBX8Q9HC52 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.03■□□□□ 0.8
CBX8Q9HC52 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.03■□□□□ 0.8
CBX8Q9HC52 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CBX8Q9HC52 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CBX8Q9HC52 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CBX8Q9HC52 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CBX8Q9HC52 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CBX8Q9HC52 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CBX8Q9HC52 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CBX8Q9HC52 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CBX8Q9HC52 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CBX8Q9HC52 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CBX8Q9HC52 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CBX8Q9HC52 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CBX8Q9HC52 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CBX8Q9HC52 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CBX8Q9HC52 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CBX8Q9HC52 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CBX8Q9HC52 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.02■□□□□ 0.8
CBX8Q9HC52 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CBX8Q9HC52 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CBX8Q9HC52 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.02■□□□□ 0.8
CBX8Q9HC52 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
CBX8Q9HC52 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.02■□□□□ 0.8
CBX8Q9HC52 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.02■□□□□ 0.8
CBX8Q9HC52 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.02■□□□□ 0.8
CBX8Q9HC52 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CBX8Q9HC52 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CBX8Q9HC52 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.02■□□□□ 0.8
CBX8Q9HC52 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
CBX8Q9HC52 PCDHB19P-201ENST00000570871 2371 ntBASIC20.02■□□□□ 0.8
CBX8Q9HC52 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.02■□□□□ 0.79
CBX8Q9HC52 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CBX8Q9HC52 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
CBX8Q9HC52 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CBX8Q9HC52 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.02■□□□□ 0.79
CBX8Q9HC52 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CBX8Q9HC52 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.02■□□□□ 0.79
CBX8Q9HC52 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
CBX8Q9HC52 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
CBX8Q9HC52 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CBX8Q9HC52 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.01■□□□□ 0.79
CBX8Q9HC52 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CBX8Q9HC52 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CBX8Q9HC52 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CBX8Q9HC52 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CBX8Q9HC52 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CBX8Q9HC52 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
CBX8Q9HC52 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.01■□□□□ 0.79
CBX8Q9HC52 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CBX8Q9HC52 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CBX8Q9HC52 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CBX8Q9HC52 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CBX8Q9HC52 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.01■□□□□ 0.79
CBX8Q9HC52 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.01■□□□□ 0.79
CBX8Q9HC52 AC009065.1-201ENST00000564055 1225 ntBASIC20.01■□□□□ 0.79
CBX8Q9HC52 WWOX-216ENST00000569818 525 ntBASIC20.01■□□□□ 0.79
CBX8Q9HC52 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.01■□□□□ 0.79
CBX8Q9HC52 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CBX8Q9HC52 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CBX8Q9HC52 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CBX8Q9HC52 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC20.01■□□□□ 0.79
CBX8Q9HC52 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CBX8Q9HC52 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CBX8Q9HC52 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CBX8Q9HC52 AC105020.1-201ENST00000435356 2205 ntBASIC20■□□□□ 0.79
CBX8Q9HC52 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CBX8Q9HC52 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CBX8Q9HC52 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
CBX8Q9HC52 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CBX8Q9HC52 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC20■□□□□ 0.79
CBX8Q9HC52 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CBX8Q9HC52 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CBX8Q9HC52 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CBX8Q9HC52 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20■□□□□ 0.79
CBX8Q9HC52 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20■□□□□ 0.79
CBX8Q9HC52 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20■□□□□ 0.79
CBX8Q9HC52 MIR3180-4-201ENST00000582223 153 ntBASIC20■□□□□ 0.79
CBX8Q9HC52 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20■□□□□ 0.79
CBX8Q9HC52 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20■□□□□ 0.79
CBX8Q9HC52 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CBX8Q9HC52 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20■□□□□ 0.79
CBX8Q9HC52 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CBX8Q9HC52 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CBX8Q9HC52 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CBX8Q9HC52 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CBX8Q9HC52 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
CBX8Q9HC52 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC20■□□□□ 0.79
CBX8Q9HC52 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CBX8Q9HC52 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CBX8Q9HC52 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.99■□□□□ 0.79
CBX8Q9HC52 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.99■□□□□ 0.79
CBX8Q9HC52 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.99■□□□□ 0.79
CBX8Q9HC52 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CBX8Q9HC52 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CBX8Q9HC52 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms