Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 AC006011.2-201ENST00000621313 1158 ntBASIC17.17■□□□□ 0.34
BRF2Q9HAW0 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
BRF2Q9HAW0 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
BRF2Q9HAW0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BRF2Q9HAW0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BRF2Q9HAW0 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
BRF2Q9HAW0 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BRF2Q9HAW0 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BRF2Q9HAW0 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.16■□□□□ 0.34
BRF2Q9HAW0 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
BRF2Q9HAW0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BRF2Q9HAW0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BRF2Q9HAW0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
BRF2Q9HAW0 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BRF2Q9HAW0 HBZP1-201ENST00000354915 429 ntBASIC17.16■□□□□ 0.34
BRF2Q9HAW0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BRF2Q9HAW0 TSPY12P-201ENST00000421279 868 ntBASIC17.16■□□□□ 0.34
BRF2Q9HAW0 KRT18P57-201ENST00000443599 1254 ntBASIC17.16■□□□□ 0.34
BRF2Q9HAW0 AP003733.1-201ENST00000491725 852 ntBASIC17.16■□□□□ 0.34
BRF2Q9HAW0 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BRF2Q9HAW0 ZNF444P1-201ENST00000559497 298 ntBASIC17.16■□□□□ 0.34
BRF2Q9HAW0 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BRF2Q9HAW0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.16■□□□□ 0.34
BRF2Q9HAW0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.16■□□□□ 0.34
BRF2Q9HAW0 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.16■□□□□ 0.34
BRF2Q9HAW0 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BRF2Q9HAW0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
BRF2Q9HAW0 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
BRF2Q9HAW0 AC133963.1-201ENST00000504166 1679 ntBASIC17.16■□□□□ 0.34
BRF2Q9HAW0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BRF2Q9HAW0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BRF2Q9HAW0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.16■□□□□ 0.34
BRF2Q9HAW0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
BRF2Q9HAW0 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BRF2Q9HAW0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BRF2Q9HAW0 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRF2Q9HAW0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.15■□□□□ 0.34
BRF2Q9HAW0 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRF2Q9HAW0 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BRF2Q9HAW0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.15■□□□□ 0.34
BRF2Q9HAW0 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
BRF2Q9HAW0 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BRF2Q9HAW0 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
BRF2Q9HAW0 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.15■□□□□ 0.34
BRF2Q9HAW0 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.15■□□□□ 0.34
BRF2Q9HAW0 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRF2Q9HAW0 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
BRF2Q9HAW0 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRF2Q9HAW0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRF2Q9HAW0 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRF2Q9HAW0 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BRF2Q9HAW0 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.15■□□□□ 0.34
BRF2Q9HAW0 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
BRF2Q9HAW0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.15■□□□□ 0.34
BRF2Q9HAW0 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.15■□□□□ 0.34
BRF2Q9HAW0 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.15■□□□□ 0.34
BRF2Q9HAW0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.15■□□□□ 0.34
BRF2Q9HAW0 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.15■□□□□ 0.34
BRF2Q9HAW0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.15■□□□□ 0.34
BRF2Q9HAW0 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
BRF2Q9HAW0 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRF2Q9HAW0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
BRF2Q9HAW0 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRF2Q9HAW0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRF2Q9HAW0 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRF2Q9HAW0 AL355312.1-201ENST00000407115 2176 ntBASIC17.15■□□□□ 0.34
BRF2Q9HAW0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
BRF2Q9HAW0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRF2Q9HAW0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
BRF2Q9HAW0 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.14■□□□□ 0.33
BRF2Q9HAW0 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.14■□□□□ 0.33
BRF2Q9HAW0 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
BRF2Q9HAW0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
BRF2Q9HAW0 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BRF2Q9HAW0 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.14■□□□□ 0.33
BRF2Q9HAW0 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.14■□□□□ 0.33
BRF2Q9HAW0 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BRF2Q9HAW0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.14■□□□□ 0.33
BRF2Q9HAW0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BRF2Q9HAW0 KRT18P38-201ENST00000449496 1282 ntBASIC17.14■□□□□ 0.33
BRF2Q9HAW0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.14■□□□□ 0.33
BRF2Q9HAW0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.14■□□□□ 0.33
BRF2Q9HAW0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
BRF2Q9HAW0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.14■□□□□ 0.33
BRF2Q9HAW0 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms