Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PIF1Q9H611 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.17■□□□□ 0.34
PIF1Q9H611 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PIF1Q9H611 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PIF1Q9H611 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PIF1Q9H611 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PIF1Q9H611 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PIF1Q9H611 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PIF1Q9H611 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
PIF1Q9H611 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PIF1Q9H611 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PIF1Q9H611 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PIF1Q9H611 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PIF1Q9H611 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PIF1Q9H611 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PIF1Q9H611 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PIF1Q9H611 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PIF1Q9H611 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PIF1Q9H611 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.16■□□□□ 0.34
PIF1Q9H611 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PIF1Q9H611 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PIF1Q9H611 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PIF1Q9H611 MIR149-201ENST00000384879 89 ntBASIC17.16■□□□□ 0.34
PIF1Q9H611 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
PIF1Q9H611 MIR4674-201ENST00000582457 87 ntBASIC17.16■□□□□ 0.34
PIF1Q9H611 MIR3180-5-201ENST00000583743 153 ntBASIC17.16■□□□□ 0.34
PIF1Q9H611 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.16■□□□□ 0.34
PIF1Q9H611 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PIF1Q9H611 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PIF1Q9H611 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PIF1Q9H611 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PIF1Q9H611 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.16■□□□□ 0.34
PIF1Q9H611 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.16■□□□□ 0.34
PIF1Q9H611 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PIF1Q9H611 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PIF1Q9H611 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PIF1Q9H611 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.16■□□□□ 0.34
PIF1Q9H611 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PIF1Q9H611 KRT18P55-202ENST00000578578 1546 ntBASIC17.16■□□□□ 0.34
PIF1Q9H611 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PIF1Q9H611 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PIF1Q9H611 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PIF1Q9H611 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PIF1Q9H611 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PIF1Q9H611 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PIF1Q9H611 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.15■□□□□ 0.34
PIF1Q9H611 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
PIF1Q9H611 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PIF1Q9H611 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PIF1Q9H611 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PIF1Q9H611 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.15■□□□□ 0.34
PIF1Q9H611 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PIF1Q9H611 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.15■□□□□ 0.34
PIF1Q9H611 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PIF1Q9H611 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PIF1Q9H611 AC093010.1-201ENST00000473625 1624 ntBASIC17.15■□□□□ 0.34
PIF1Q9H611 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.15■□□□□ 0.34
PIF1Q9H611 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.15■□□□□ 0.34
PIF1Q9H611 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PIF1Q9H611 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PIF1Q9H611 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PIF1Q9H611 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
PIF1Q9H611 FER1L4-210ENST00000615531 5998 ntBASIC17.15■□□□□ 0.34
PIF1Q9H611 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.15■□□□□ 0.34
PIF1Q9H611 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PIF1Q9H611 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
PIF1Q9H611 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.15■□□□□ 0.34
PIF1Q9H611 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.15■□□□□ 0.34
PIF1Q9H611 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PIF1Q9H611 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.15■□□□□ 0.34
PIF1Q9H611 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PIF1Q9H611 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.15■□□□□ 0.34
PIF1Q9H611 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PIF1Q9H611 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PIF1Q9H611 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PIF1Q9H611 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PIF1Q9H611 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PIF1Q9H611 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PIF1Q9H611 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.15■□□□□ 0.34
PIF1Q9H611 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PIF1Q9H611 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PIF1Q9H611 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PIF1Q9H611 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PIF1Q9H611 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PIF1Q9H611 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PIF1Q9H611 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.14■□□□□ 0.33
PIF1Q9H611 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PIF1Q9H611 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PIF1Q9H611 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PIF1Q9H611 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
PIF1Q9H611 AC124067.4-201ENST00000519691 2379 ntBASIC17.14■□□□□ 0.33
PIF1Q9H611 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PIF1Q9H611 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PIF1Q9H611 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PIF1Q9H611 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PIF1Q9H611 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.14■□□□□ 0.33
PIF1Q9H611 AC097488.1-201ENST00000507834 756 ntBASIC17.14■□□□□ 0.33
PIF1Q9H611 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PIF1Q9H611 CD177P1-201ENST00000606252 935 ntBASIC17.14■□□□□ 0.33
PIF1Q9H611 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms