Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.63■□□□□ 0.73
TRAIPQ9BWF2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.63■□□□□ 0.73
TRAIPQ9BWF2 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAIPQ9BWF2 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAIPQ9BWF2 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAIPQ9BWF2 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAIPQ9BWF2 HLA-A-201ENST00000376802 1334 ntBASIC19.62■□□□□ 0.73
TRAIPQ9BWF2 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAIPQ9BWF2 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAIPQ9BWF2 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.62■□□□□ 0.73
TRAIPQ9BWF2 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.62■□□□□ 0.73
TRAIPQ9BWF2 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.62■□□□□ 0.73
TRAIPQ9BWF2 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.62■□□□□ 0.73
TRAIPQ9BWF2 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.62■□□□□ 0.73
TRAIPQ9BWF2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.62■□□□□ 0.73
TRAIPQ9BWF2 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TRAIPQ9BWF2 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.62■□□□□ 0.73
TRAIPQ9BWF2 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAIPQ9BWF2 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAIPQ9BWF2 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TRAIPQ9BWF2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.62■□□□□ 0.73
TRAIPQ9BWF2 INTS4P1-201ENST00000438455 1935 ntBASIC19.62■□□□□ 0.73
TRAIPQ9BWF2 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAIPQ9BWF2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAIPQ9BWF2 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 AC132008.2-207ENST00000454517 770 ntBASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TRAIPQ9BWF2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.6■□□□□ 0.73
TRAIPQ9BWF2 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.6■□□□□ 0.73
TRAIPQ9BWF2 AL354751.1-201ENST00000412768 1863 ntBASIC19.6■□□□□ 0.73
TRAIPQ9BWF2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAIPQ9BWF2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAIPQ9BWF2 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.6■□□□□ 0.73
TRAIPQ9BWF2 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.6■□□□□ 0.73
TRAIPQ9BWF2 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAIPQ9BWF2 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.6■□□□□ 0.73
TRAIPQ9BWF2 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
TRAIPQ9BWF2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAIPQ9BWF2 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAIPQ9BWF2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAIPQ9BWF2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TRAIPQ9BWF2 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
TRAIPQ9BWF2 RBM17P3-201ENST00000417687 1192 ntBASIC19.6■□□□□ 0.73
TRAIPQ9BWF2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.6■□□□□ 0.73
TRAIPQ9BWF2 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAIPQ9BWF2 RNA5SP419-201ENST00000515908 135 ntBASIC19.6■□□□□ 0.73
TRAIPQ9BWF2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.6■□□□□ 0.73
TRAIPQ9BWF2 TP73-AS1-207ENST00000624167 988 ntBASIC19.6■□□□□ 0.73
TRAIPQ9BWF2 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAIPQ9BWF2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAIPQ9BWF2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAIPQ9BWF2 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAIPQ9BWF2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAIPQ9BWF2 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TRAIPQ9BWF2 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAIPQ9BWF2 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAIPQ9BWF2 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
TRAIPQ9BWF2 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TRAIPQ9BWF2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TRAIPQ9BWF2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms