Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 DRAXINP1-201ENST00000437611 948 ntBASIC12.51□□□□□ -0.41
UPK3BQ9BT76 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 AC092329.2-201ENST00000598402 547 ntBASIC12.51□□□□□ -0.41
UPK3BQ9BT76 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 HES2-202ENST00000377836 507 ntTSL 2 BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 GUSBP12-201ENST00000513727 720 ntBASIC12.5□□□□□ -0.41
UPK3BQ9BT76 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 ANKRD20A8P-203ENST00000641373 517 ntBASIC12.5□□□□□ -0.41
UPK3BQ9BT76 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 UBC-206ENST00000538617 1303 ntTSL 5 BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 ANO7L1-203ENST00000602586 1720 ntBASIC12.5□□□□□ -0.41
UPK3BQ9BT76 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
UPK3BQ9BT76 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 SDHAP2-201ENST00000455183 2001 ntBASIC12.49□□□□□ -0.41
UPK3BQ9BT76 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 UROS-202ENST00000368778 1556 ntTSL 2 BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 KRT18P1-202ENST00000452408 1331 ntBASIC12.49□□□□□ -0.41
UPK3BQ9BT76 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UPK3BQ9BT76 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms