Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 AP002383.4-201ENST00000442518 975 ntBASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 AC011840.4-201ENST00000578471 627 ntBASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 NPAP1P7-201ENST00000613027 823 ntBASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CCM2Q9BSQ5 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCM2Q9BSQ5 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CCM2Q9BSQ5 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
CCM2Q9BSQ5 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.64■□□□□ 0.42
CCM2Q9BSQ5 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCM2Q9BSQ5 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CCM2Q9BSQ5 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.64■□□□□ 0.41
CCM2Q9BSQ5 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCM2Q9BSQ5 KRT18P55-202ENST00000578578 1546 ntBASIC17.64■□□□□ 0.41
CCM2Q9BSQ5 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CCM2Q9BSQ5 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.64■□□□□ 0.41
CCM2Q9BSQ5 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.64■□□□□ 0.41
CCM2Q9BSQ5 VENTXP7-201ENST00000475503 772 ntBASIC17.64■□□□□ 0.41
CCM2Q9BSQ5 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCM2Q9BSQ5 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.64■□□□□ 0.41
CCM2Q9BSQ5 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.64■□□□□ 0.41
CCM2Q9BSQ5 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCM2Q9BSQ5 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.64■□□□□ 0.41
CCM2Q9BSQ5 AP002414.4-201ENST00000589764 1148 ntBASIC17.64■□□□□ 0.41
CCM2Q9BSQ5 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.64■□□□□ 0.41
CCM2Q9BSQ5 AC092329.2-201ENST00000598402 547 ntBASIC17.64■□□□□ 0.41
CCM2Q9BSQ5 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.64■□□□□ 0.41
CCM2Q9BSQ5 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCM2Q9BSQ5 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.64■□□□□ 0.41
CCM2Q9BSQ5 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.64■□□□□ 0.41
CCM2Q9BSQ5 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.64■□□□□ 0.41
CCM2Q9BSQ5 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCM2Q9BSQ5 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCM2Q9BSQ5 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.64■□□□□ 0.41
CCM2Q9BSQ5 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCM2Q9BSQ5 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCM2Q9BSQ5 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCM2Q9BSQ5 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCM2Q9BSQ5 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CCM2Q9BSQ5 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCM2Q9BSQ5 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2Q9BSQ5 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2Q9BSQ5 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2Q9BSQ5 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2Q9BSQ5 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2Q9BSQ5 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCM2Q9BSQ5 NOC2LP1-202ENST00000452600 2235 ntBASIC17.63■□□□□ 0.41
CCM2Q9BSQ5 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCM2Q9BSQ5 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
CCM2Q9BSQ5 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2Q9BSQ5 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2Q9BSQ5 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2Q9BSQ5 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
CCM2Q9BSQ5 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2Q9BSQ5 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CCM2Q9BSQ5 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2Q9BSQ5 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.63■□□□□ 0.41
CCM2Q9BSQ5 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.63■□□□□ 0.41
CCM2Q9BSQ5 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.63■□□□□ 0.41
CCM2Q9BSQ5 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.63■□□□□ 0.41
CCM2Q9BSQ5 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2Q9BSQ5 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2Q9BSQ5 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2Q9BSQ5 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2Q9BSQ5 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2Q9BSQ5 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2Q9BSQ5 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CCM2Q9BSQ5 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2Q9BSQ5 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2Q9BSQ5 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.63■□□□□ 0.41
CCM2Q9BSQ5 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CCM2Q9BSQ5 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.63■□□□□ 0.41
CCM2Q9BSQ5 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2Q9BSQ5 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCM2Q9BSQ5 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.62■□□□□ 0.41
CCM2Q9BSQ5 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCM2Q9BSQ5 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCM2Q9BSQ5 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCM2Q9BSQ5 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCM2Q9BSQ5 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.62■□□□□ 0.41
CCM2Q9BSQ5 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms