Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 TSPY7P-201ENST00000431358 1114 ntBASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 AC007663.1-201ENST00000438948 1240 ntBASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 CCR12P-201ENST00000446203 998 ntBASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 BX088651.1-201ENST00000540551 451 ntBASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
HDHD3Q9BSH5 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 USP36-216ENST00000589424 970 ntTSL 5 BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 CROCCP2-202ENST00000412962 2773 ntBASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HDHD3Q9BSH5 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 LINC00602-201ENST00000629776 2065 ntBASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 INGX-201ENST00000359239 846 ntBASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 MIR1238-201ENST00000408483 83 ntBASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.14■□□□□ 0.01
HDHD3Q9BSH5 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms