Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK1Q99986 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.86■□□□□ 0.13
VRK1Q99986 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VRK1Q99986 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VRK1Q99986 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK1Q99986 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK1Q99986 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.86■□□□□ 0.13
VRK1Q99986 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.86■□□□□ 0.13
VRK1Q99986 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.86■□□□□ 0.13
VRK1Q99986 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.86■□□□□ 0.13
VRK1Q99986 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.86■□□□□ 0.13
VRK1Q99986 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VRK1Q99986 AC069148.1-201ENST00000608741 768 ntBASIC15.86■□□□□ 0.13
VRK1Q99986 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK1Q99986 AC116407.4-201ENST00000623319 1061 ntBASIC15.86■□□□□ 0.13
VRK1Q99986 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.86■□□□□ 0.13
VRK1Q99986 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK1Q99986 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
VRK1Q99986 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VRK1Q99986 AC008764.6-201ENST00000595909 2069 ntBASIC15.86■□□□□ 0.13
VRK1Q99986 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
VRK1Q99986 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
VRK1Q99986 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK1Q99986 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.86■□□□□ 0.13
VRK1Q99986 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK1Q99986 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VRK1Q99986 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK1Q99986 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VRK1Q99986 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK1Q99986 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK1Q99986 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.86■□□□□ 0.13
VRK1Q99986 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK1Q99986 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
VRK1Q99986 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VRK1Q99986 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK1Q99986 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.86■□□□□ 0.13
VRK1Q99986 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK1Q99986 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
VRK1Q99986 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK1Q99986 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK1Q99986 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK1Q99986 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VRK1Q99986 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK1Q99986 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
VRK1Q99986 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK1Q99986 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
VRK1Q99986 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK1Q99986 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK1Q99986 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VRK1Q99986 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK1Q99986 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.85■□□□□ 0.13
VRK1Q99986 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK1Q99986 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
VRK1Q99986 HBZP1-201ENST00000354915 429 ntBASIC15.85■□□□□ 0.13
VRK1Q99986 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VRK1Q99986 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK1Q99986 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.85■□□□□ 0.13
VRK1Q99986 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VRK1Q99986 SEC1P-202ENST00000473944 940 ntBASIC15.85■□□□□ 0.13
VRK1Q99986 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.85■□□□□ 0.13
VRK1Q99986 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.85■□□□□ 0.13
VRK1Q99986 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.85■□□□□ 0.13
VRK1Q99986 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.85■□□□□ 0.13
VRK1Q99986 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.85■□□□□ 0.13
VRK1Q99986 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.85■□□□□ 0.13
VRK1Q99986 HYMAI.1-201ENST00000620949 238 ntBASIC15.85■□□□□ 0.13
VRK1Q99986 AL157888.1-201ENST00000631930 593 ntBASIC15.85■□□□□ 0.13
VRK1Q99986 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK1Q99986 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK1Q99986 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.85■□□□□ 0.13
VRK1Q99986 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK1Q99986 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK1Q99986 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK1Q99986 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK1Q99986 TNRC18P3-201ENST00000441896 2691 ntBASIC15.85■□□□□ 0.13
VRK1Q99986 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VRK1Q99986 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK1Q99986 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK1Q99986 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK1Q99986 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK1Q99986 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
VRK1Q99986 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK1Q99986 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VRK1Q99986 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
VRK1Q99986 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VRK1Q99986 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VRK1Q99986 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VRK1Q99986 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
VRK1Q99986 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
VRK1Q99986 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VRK1Q99986 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.84■□□□□ 0.13
VRK1Q99986 ESPNP-201ENST00000270691 2015 ntBASIC15.84■□□□□ 0.13
VRK1Q99986 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
VRK1Q99986 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VRK1Q99986 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
VRK1Q99986 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VRK1Q99986 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VRK1Q99986 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VRK1Q99986 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VRK1Q99986 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms