Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAD9AQ99638 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
RAD9AQ99638 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
RAD9AQ99638 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
RAD9AQ99638 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAD9AQ99638 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAD9AQ99638 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.06■□□□□ 0.64
RAD9AQ99638 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.06■□□□□ 0.64
RAD9AQ99638 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RAD9AQ99638 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RAD9AQ99638 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAD9AQ99638 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.06■□□□□ 0.64
RAD9AQ99638 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.06■□□□□ 0.64
RAD9AQ99638 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.06■□□□□ 0.64
RAD9AQ99638 GPR89P-201ENST00000407924 1495 ntBASIC19.06■□□□□ 0.64
RAD9AQ99638 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.06■□□□□ 0.64
RAD9AQ99638 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAD9AQ99638 COX5BP2-201ENST00000392354 334 ntBASIC19.06■□□□□ 0.64
RAD9AQ99638 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.06■□□□□ 0.64
RAD9AQ99638 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.06■□□□□ 0.64
RAD9AQ99638 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAD9AQ99638 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.06■□□□□ 0.64
RAD9AQ99638 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.06■□□□□ 0.64
RAD9AQ99638 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.06■□□□□ 0.64
RAD9AQ99638 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.06■□□□□ 0.64
RAD9AQ99638 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.06■□□□□ 0.64
RAD9AQ99638 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
RAD9AQ99638 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.06■□□□□ 0.64
RAD9AQ99638 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAD9AQ99638 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAD9AQ99638 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAD9AQ99638 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
RAD9AQ99638 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.06■□□□□ 0.64
RAD9AQ99638 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
RAD9AQ99638 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
RAD9AQ99638 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAD9AQ99638 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RAD9AQ99638 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.05■□□□□ 0.64
RAD9AQ99638 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RAD9AQ99638 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RAD9AQ99638 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RAD9AQ99638 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.05■□□□□ 0.64
RAD9AQ99638 RPS15P9-201ENST00000494093 319 ntBASIC19.05■□□□□ 0.64
RAD9AQ99638 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.05■□□□□ 0.64
RAD9AQ99638 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.05■□□□□ 0.64
RAD9AQ99638 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.05■□□□□ 0.64
RAD9AQ99638 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.05■□□□□ 0.64
RAD9AQ99638 AC106028.4-201ENST00000614509 607 ntBASIC19.05■□□□□ 0.64
RAD9AQ99638 AC004790.2-201ENST00000623588 572 ntBASIC19.05■□□□□ 0.64
RAD9AQ99638 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.05■□□□□ 0.64
RAD9AQ99638 NCF1C-201ENST00000438382 1427 ntBASIC19.05■□□□□ 0.64
RAD9AQ99638 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.05■□□□□ 0.64
RAD9AQ99638 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAD9AQ99638 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RAD9AQ99638 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.05■□□□□ 0.64
RAD9AQ99638 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.05■□□□□ 0.64
RAD9AQ99638 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RAD9AQ99638 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
RAD9AQ99638 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAD9AQ99638 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAD9AQ99638 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAD9AQ99638 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RAD9AQ99638 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.04■□□□□ 0.64
RAD9AQ99638 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAD9AQ99638 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAD9AQ99638 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RAD9AQ99638 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAD9AQ99638 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.04■□□□□ 0.64
RAD9AQ99638 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAD9AQ99638 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.04■□□□□ 0.64
RAD9AQ99638 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.04■□□□□ 0.64
RAD9AQ99638 AC011467.4-201ENST00000594891 528 ntBASIC19.04■□□□□ 0.64
RAD9AQ99638 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAD9AQ99638 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.04■□□□□ 0.64
RAD9AQ99638 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAD9AQ99638 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.04■□□□□ 0.64
RAD9AQ99638 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RAD9AQ99638 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAD9AQ99638 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAD9AQ99638 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RAD9AQ99638 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.03■□□□□ 0.64
RAD9AQ99638 AC005082.1-201ENST00000413042 2259 ntBASIC19.03■□□□□ 0.64
RAD9AQ99638 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RAD9AQ99638 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAD9AQ99638 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.03■□□□□ 0.64
RAD9AQ99638 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.03■□□□□ 0.64
RAD9AQ99638 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.03■□□□□ 0.64
RAD9AQ99638 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.03■□□□□ 0.64
RAD9AQ99638 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.03■□□□□ 0.64
RAD9AQ99638 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.03■□□□□ 0.64
RAD9AQ99638 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.03■□□□□ 0.64
RAD9AQ99638 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAD9AQ99638 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAD9AQ99638 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAD9AQ99638 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.03■□□□□ 0.64
RAD9AQ99638 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAD9AQ99638 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAD9AQ99638 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAD9AQ99638 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAD9AQ99638 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms