Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.19■□□□□ 0.66
YME1L1Q96TA2 KRT18P28-201ENST00000453838 1332 ntBASIC19.19■□□□□ 0.66
YME1L1Q96TA2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
YME1L1Q96TA2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
YME1L1Q96TA2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
YME1L1Q96TA2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
YME1L1Q96TA2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
YME1L1Q96TA2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
YME1L1Q96TA2 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.18■□□□□ 0.66
YME1L1Q96TA2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
YME1L1Q96TA2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
YME1L1Q96TA2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
YME1L1Q96TA2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
YME1L1Q96TA2 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.18■□□□□ 0.66
YME1L1Q96TA2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.18■□□□□ 0.66
YME1L1Q96TA2 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
YME1L1Q96TA2 PRYP5-201ENST00000451909 266 ntBASIC19.18■□□□□ 0.66
YME1L1Q96TA2 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.18■□□□□ 0.66
YME1L1Q96TA2 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.18■□□□□ 0.66
YME1L1Q96TA2 AC122714.2-201ENST00000502787 707 ntBASIC19.18■□□□□ 0.66
YME1L1Q96TA2 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
YME1L1Q96TA2 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.18■□□□□ 0.66
YME1L1Q96TA2 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
YME1L1Q96TA2 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.18■□□□□ 0.66
YME1L1Q96TA2 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
YME1L1Q96TA2 AC005829.1-201ENST00000570002 483 ntBASIC19.18■□□□□ 0.66
YME1L1Q96TA2 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.18■□□□□ 0.66
YME1L1Q96TA2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
YME1L1Q96TA2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
YME1L1Q96TA2 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
YME1L1Q96TA2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
YME1L1Q96TA2 AC120498.9-201ENST00000339021 3867 ntBASIC19.18■□□□□ 0.66
YME1L1Q96TA2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
YME1L1Q96TA2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
YME1L1Q96TA2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
YME1L1Q96TA2 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
YME1L1Q96TA2 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
YME1L1Q96TA2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
YME1L1Q96TA2 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
YME1L1Q96TA2 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
YME1L1Q96TA2 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.17■□□□□ 0.66
YME1L1Q96TA2 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
YME1L1Q96TA2 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
YME1L1Q96TA2 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.17■□□□□ 0.66
YME1L1Q96TA2 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
YME1L1Q96TA2 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.17■□□□□ 0.66
YME1L1Q96TA2 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.17■□□□□ 0.66
YME1L1Q96TA2 MCCD1P2-201ENST00000423228 335 ntBASIC19.17■□□□□ 0.66
YME1L1Q96TA2 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.17■□□□□ 0.66
YME1L1Q96TA2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.17■□□□□ 0.66
YME1L1Q96TA2 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
YME1L1Q96TA2 SNHG9-202ENST00000564014 471 ntBASIC19.17■□□□□ 0.66
YME1L1Q96TA2 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.17■□□□□ 0.66
YME1L1Q96TA2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
YME1L1Q96TA2 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.17■□□□□ 0.66
YME1L1Q96TA2 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.17■□□□□ 0.66
YME1L1Q96TA2 AD001527.2-201ENST00000622994 785 ntBASIC19.17■□□□□ 0.66
YME1L1Q96TA2 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.17■□□□□ 0.66
YME1L1Q96TA2 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
YME1L1Q96TA2 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
YME1L1Q96TA2 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
YME1L1Q96TA2 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
YME1L1Q96TA2 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
YME1L1Q96TA2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.17■□□□□ 0.66
YME1L1Q96TA2 AC132938.6-201ENST00000623828 1655 ntBASIC19.17■□□□□ 0.66
YME1L1Q96TA2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
YME1L1Q96TA2 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.17■□□□□ 0.66
YME1L1Q96TA2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
YME1L1Q96TA2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.16■□□□□ 0.66
YME1L1Q96TA2 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
YME1L1Q96TA2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
YME1L1Q96TA2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
YME1L1Q96TA2 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
YME1L1Q96TA2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
YME1L1Q96TA2 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
YME1L1Q96TA2 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.16■□□□□ 0.66
YME1L1Q96TA2 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
YME1L1Q96TA2 AC010460.3-201ENST00000511359 1579 ntBASIC19.16■□□□□ 0.66
YME1L1Q96TA2 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
YME1L1Q96TA2 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
YME1L1Q96TA2 SPDYE21P-201ENST00000413323 827 ntBASIC19.16■□□□□ 0.66
YME1L1Q96TA2 AC096633.1-201ENST00000422446 749 ntBASIC19.16■□□□□ 0.66
YME1L1Q96TA2 METTL21AP1-201ENST00000438852 635 ntBASIC19.16■□□□□ 0.66
YME1L1Q96TA2 KRT18P2-201ENST00000447938 1258 ntBASIC19.16■□□□□ 0.66
YME1L1Q96TA2 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
YME1L1Q96TA2 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
YME1L1Q96TA2 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.16■□□□□ 0.66
YME1L1Q96TA2 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
YME1L1Q96TA2 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.16■□□□□ 0.66
YME1L1Q96TA2 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
YME1L1Q96TA2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
YME1L1Q96TA2 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
YME1L1Q96TA2 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
YME1L1Q96TA2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
YME1L1Q96TA2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.16■□□□□ 0.66
YME1L1Q96TA2 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
YME1L1Q96TA2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.16■□□□□ 0.66
YME1L1Q96TA2 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.16■□□□□ 0.66
YME1L1Q96TA2 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.16■□□□□ 0.66
YME1L1Q96TA2 SIGLEC16-201ENST00000599858 1437 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms