Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
NR1H4Q96RI1 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
NR1H4Q96RI1 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.91■□□□□ 0.3
NR1H4Q96RI1 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NR1H4Q96RI1 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
NR1H4Q96RI1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NR1H4Q96RI1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NR1H4Q96RI1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.91■□□□□ 0.3
NR1H4Q96RI1 YBX1P10-201ENST00000444752 975 ntBASIC16.91■□□□□ 0.3
NR1H4Q96RI1 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NR1H4Q96RI1 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NR1H4Q96RI1 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NR1H4Q96RI1 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.91■□□□□ 0.3
NR1H4Q96RI1 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NR1H4Q96RI1 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NR1H4Q96RI1 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NR1H4Q96RI1 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NR1H4Q96RI1 AL513523.2-202ENST00000427283 2040 ntBASIC16.91■□□□□ 0.3
NR1H4Q96RI1 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.9■□□□□ 0.3
NR1H4Q96RI1 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NR1H4Q96RI1 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NR1H4Q96RI1 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NR1H4Q96RI1 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NR1H4Q96RI1 HYMAI-201ENST00000635591 3347 ntBASIC16.9■□□□□ 0.3
NR1H4Q96RI1 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NR1H4Q96RI1 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.9■□□□□ 0.3
NR1H4Q96RI1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NR1H4Q96RI1 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
NR1H4Q96RI1 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.9■□□□□ 0.3
NR1H4Q96RI1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NR1H4Q96RI1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.9■□□□□ 0.3
NR1H4Q96RI1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.9■□□□□ 0.3
NR1H4Q96RI1 AC007322.1-201ENST00000426983 750 ntBASIC16.9■□□□□ 0.3
NR1H4Q96RI1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.9■□□□□ 0.3
NR1H4Q96RI1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NR1H4Q96RI1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NR1H4Q96RI1 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.9■□□□□ 0.3
NR1H4Q96RI1 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.9■□□□□ 0.3
NR1H4Q96RI1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NR1H4Q96RI1 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NR1H4Q96RI1 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NR1H4Q96RI1 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NR1H4Q96RI1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NR1H4Q96RI1 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.9■□□□□ 0.3
NR1H4Q96RI1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NR1H4Q96RI1 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.9■□□□□ 0.3
NR1H4Q96RI1 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NR1H4Q96RI1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NR1H4Q96RI1 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
NR1H4Q96RI1 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.9■□□□□ 0.3
NR1H4Q96RI1 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.9■□□□□ 0.3
NR1H4Q96RI1 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.9■□□□□ 0.3
NR1H4Q96RI1 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NR1H4Q96RI1 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
NR1H4Q96RI1 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
NR1H4Q96RI1 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.89■□□□□ 0.29
NR1H4Q96RI1 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H4Q96RI1 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H4Q96RI1 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H4Q96RI1 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H4Q96RI1 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H4Q96RI1 AC006015.1-201ENST00000429970 570 ntBASIC16.89■□□□□ 0.29
NR1H4Q96RI1 CYP2T1P-201ENST00000432607 1285 ntBASIC16.89■□□□□ 0.29
NR1H4Q96RI1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.89■□□□□ 0.29
NR1H4Q96RI1 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NR1H4Q96RI1 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H4Q96RI1 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.89■□□□□ 0.29
NR1H4Q96RI1 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.89■□□□□ 0.29
NR1H4Q96RI1 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H4Q96RI1 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H4Q96RI1 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H4Q96RI1 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H4Q96RI1 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NR1H4Q96RI1 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NR1H4Q96RI1 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H4Q96RI1 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H4Q96RI1 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.89■□□□□ 0.29
NR1H4Q96RI1 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H4Q96RI1 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H4Q96RI1 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H4Q96RI1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NR1H4Q96RI1 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NR1H4Q96RI1 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NR1H4Q96RI1 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NR1H4Q96RI1 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NR1H4Q96RI1 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NR1H4Q96RI1 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.88■□□□□ 0.29
NR1H4Q96RI1 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
NR1H4Q96RI1 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NR1H4Q96RI1 AC023824.1-201ENST00000562945 2975 ntBASIC16.88■□□□□ 0.29
NR1H4Q96RI1 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NR1H4Q96RI1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.88■□□□□ 0.29
NR1H4Q96RI1 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
NR1H4Q96RI1 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NR1H4Q96RI1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.88■□□□□ 0.29
NR1H4Q96RI1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NR1H4Q96RI1 AL162430.1-201ENST00000480705 870 ntBASIC16.88■□□□□ 0.29
NR1H4Q96RI1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.88■□□□□ 0.29
NR1H4Q96RI1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.88■□□□□ 0.29
NR1H4Q96RI1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms