Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 SLC29A4P2-201ENST00000504749 1089 ntBASIC13.59□□□□□ -0.23
AP1S3Q96PC3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 AC008687.6-201ENST00000596318 630 ntBASIC13.59□□□□□ -0.23
AP1S3Q96PC3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 GNAS-203ENST00000306120 1878 ntBASIC13.59□□□□□ -0.23
AP1S3Q96PC3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 AC008764.6-201ENST00000595909 2069 ntBASIC13.59□□□□□ -0.23
AP1S3Q96PC3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.59□□□□□ -0.23
AP1S3Q96PC3 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
AP1S3Q96PC3 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
AP1S3Q96PC3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
AP1S3Q96PC3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
AP1S3Q96PC3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
AP1S3Q96PC3 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
AP1S3Q96PC3 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
AP1S3Q96PC3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC13.58□□□□□ -0.23
AP1S3Q96PC3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC13.58□□□□□ -0.23
AP1S3Q96PC3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
AP1S3Q96PC3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
AP1S3Q96PC3 RCC2P6-201ENST00000526625 1557 ntBASIC13.58□□□□□ -0.23
AP1S3Q96PC3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC13.58□□□□□ -0.23
AP1S3Q96PC3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
AP1S3Q96PC3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
AP1S3Q96PC3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC13.58□□□□□ -0.23
AP1S3Q96PC3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 AC112777.1-201ENST00000540175 1423 ntBASIC13.58□□□□□ -0.24
AP1S3Q96PC3 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 CDCA4P2-201ENST00000441182 718 ntBASIC13.58□□□□□ -0.24
AP1S3Q96PC3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 C1QL1P1-201ENST00000568105 661 ntBASIC13.58□□□□□ -0.24
AP1S3Q96PC3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 AC004264.1-201ENST00000608354 794 ntBASIC13.58□□□□□ -0.24
AP1S3Q96PC3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.58□□□□□ -0.24
AP1S3Q96PC3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
AP1S3Q96PC3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms