Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.35■□□□□ 0.69
LRCH3Q96II8 ELK2BP-201ENST00000415014 1224 ntBASIC19.35■□□□□ 0.69
LRCH3Q96II8 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRCH3Q96II8 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.35■□□□□ 0.69
LRCH3Q96II8 ACTG1P14-201ENST00000446382 1122 ntBASIC19.35■□□□□ 0.69
LRCH3Q96II8 UGT1A2P-201ENST00000454886 866 ntBASIC19.35■□□□□ 0.69
LRCH3Q96II8 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.35■□□□□ 0.69
LRCH3Q96II8 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.35■□□□□ 0.69
LRCH3Q96II8 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.35■□□□□ 0.69
LRCH3Q96II8 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.35■□□□□ 0.69
LRCH3Q96II8 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.35■□□□□ 0.69
LRCH3Q96II8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
LRCH3Q96II8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRCH3Q96II8 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRCH3Q96II8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.35■□□□□ 0.69
LRCH3Q96II8 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.35■□□□□ 0.69
LRCH3Q96II8 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LRCH3Q96II8 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRCH3Q96II8 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.34■□□□□ 0.69
LRCH3Q96II8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.34■□□□□ 0.69
LRCH3Q96II8 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRCH3Q96II8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRCH3Q96II8 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
LRCH3Q96II8 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRCH3Q96II8 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC19.34■□□□□ 0.69
LRCH3Q96II8 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRCH3Q96II8 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.34■□□□□ 0.69
LRCH3Q96II8 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC19.34■□□□□ 0.69
LRCH3Q96II8 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.34■□□□□ 0.69
LRCH3Q96II8 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRCH3Q96II8 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.34■□□□□ 0.69
LRCH3Q96II8 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
LRCH3Q96II8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRCH3Q96II8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.34■□□□□ 0.69
LRCH3Q96II8 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.34■□□□□ 0.69
LRCH3Q96II8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.34■□□□□ 0.69
LRCH3Q96II8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRCH3Q96II8 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRCH3Q96II8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRCH3Q96II8 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRCH3Q96II8 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRCH3Q96II8 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRCH3Q96II8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRCH3Q96II8 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LRCH3Q96II8 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRCH3Q96II8 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
LRCH3Q96II8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRCH3Q96II8 AC018445.3-201ENST00000624177 1945 ntBASIC19.33■□□□□ 0.69
LRCH3Q96II8 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRCH3Q96II8 AC079776.2-201ENST00000641154 1609 ntBASIC19.33■□□□□ 0.69
LRCH3Q96II8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRCH3Q96II8 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRCH3Q96II8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRCH3Q96II8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
LRCH3Q96II8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRCH3Q96II8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
LRCH3Q96II8 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRCH3Q96II8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRCH3Q96II8 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRCH3Q96II8 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRCH3Q96II8 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRCH3Q96II8 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
LRCH3Q96II8 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.33■□□□□ 0.68
LRCH3Q96II8 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.33■□□□□ 0.68
LRCH3Q96II8 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRCH3Q96II8 AC023141.5-201ENST00000458585 616 ntBASIC19.33■□□□□ 0.68
LRCH3Q96II8 AC113404.2-201ENST00000507884 177 ntBASIC19.33■□□□□ 0.68
LRCH3Q96II8 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.33■□□□□ 0.68
LRCH3Q96II8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.33■□□□□ 0.68
LRCH3Q96II8 AC004877.2-201ENST00000623941 599 ntBASIC19.33■□□□□ 0.68
LRCH3Q96II8 AC105339.1-204ENST00000636249 355 ntBASIC19.33■□□□□ 0.68
LRCH3Q96II8 KRT8P32-201ENST00000512863 1461 ntBASIC19.33■□□□□ 0.68
LRCH3Q96II8 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRCH3Q96II8 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRCH3Q96II8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.33■□□□□ 0.68
LRCH3Q96II8 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRCH3Q96II8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
LRCH3Q96II8 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH3Q96II8 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.32■□□□□ 0.68
LRCH3Q96II8 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH3Q96II8 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH3Q96II8 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH3Q96II8 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.32■□□□□ 0.68
LRCH3Q96II8 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.32■□□□□ 0.68
LRCH3Q96II8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH3Q96II8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LRCH3Q96II8 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH3Q96II8 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
LRCH3Q96II8 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.32■□□□□ 0.68
LRCH3Q96II8 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.32■□□□□ 0.68
LRCH3Q96II8 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.32■□□□□ 0.68
LRCH3Q96II8 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH3Q96II8 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH3Q96II8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH3Q96II8 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC19.32■□□□□ 0.68
LRCH3Q96II8 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC19.32■□□□□ 0.68
LRCH3Q96II8 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
LRCH3Q96II8 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH3Q96II8 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH3Q96II8 MIR6799-201ENST00000620297 69 ntBASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms