Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.62■□□□□ 0.09
CPNE2Q96FN4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CPNE2Q96FN4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.62■□□□□ 0.09
CPNE2Q96FN4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CPNE2Q96FN4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.62■□□□□ 0.09
CPNE2Q96FN4 AP003071.4-201ENST00000562276 1284 ntBASIC15.62■□□□□ 0.09
CPNE2Q96FN4 AL512604.3-201ENST00000569583 964 ntBASIC15.62■□□□□ 0.09
CPNE2Q96FN4 MIR4674-201ENST00000582457 87 ntBASIC15.62■□□□□ 0.09
CPNE2Q96FN4 AL023803.3-201ENST00000615559 522 ntBASIC15.62■□□□□ 0.09
CPNE2Q96FN4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CPNE2Q96FN4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CPNE2Q96FN4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.62■□□□□ 0.09
CPNE2Q96FN4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPNE2Q96FN4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPNE2Q96FN4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
CPNE2Q96FN4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPNE2Q96FN4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CPNE2Q96FN4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
CPNE2Q96FN4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPNE2Q96FN4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CPNE2Q96FN4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPNE2Q96FN4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPNE2Q96FN4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPNE2Q96FN4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.62■□□□□ 0.09
CPNE2Q96FN4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
CPNE2Q96FN4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.62■□□□□ 0.09
CPNE2Q96FN4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 AC084018.2-201ENST00000613093 2607 ntBASIC15.61■□□□□ 0.09
CPNE2Q96FN4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.61■□□□□ 0.09
CPNE2Q96FN4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.61■□□□□ 0.09
CPNE2Q96FN4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 AC104390.1-201ENST00000555663 520 ntBASIC15.61■□□□□ 0.09
CPNE2Q96FN4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 CR769767.2-201ENST00000622735 460 ntBASIC15.61■□□□□ 0.09
CPNE2Q96FN4 AC010653.2-201ENST00000623505 997 ntBASIC15.61■□□□□ 0.09
CPNE2Q96FN4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.61■□□□□ 0.09
CPNE2Q96FN4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
CPNE2Q96FN4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE2Q96FN4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE2Q96FN4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.6■□□□□ 0.09
CPNE2Q96FN4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CPNE2Q96FN4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE2Q96FN4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CPNE2Q96FN4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE2Q96FN4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE2Q96FN4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE2Q96FN4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE2Q96FN4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE2Q96FN4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.6■□□□□ 0.09
CPNE2Q96FN4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE2Q96FN4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CPNE2Q96FN4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.6■□□□□ 0.09
CPNE2Q96FN4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.6■□□□□ 0.09
CPNE2Q96FN4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.6■□□□□ 0.09
CPNE2Q96FN4 LINC00896-202ENST00000609602 2128 ntBASIC15.6■□□□□ 0.09
CPNE2Q96FN4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CPNE2Q96FN4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE2Q96FN4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CPNE2Q96FN4 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms