Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM9SF4Q92544 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TM9SF4Q92544 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TM9SF4Q92544 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM9SF4Q92544 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TM9SF4Q92544 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TM9SF4Q92544 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM9SF4Q92544 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM9SF4Q92544 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.95■□□□□ 0.3
TM9SF4Q92544 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM9SF4Q92544 IGHGP-201ENST00000390555 1178 ntBASIC16.95■□□□□ 0.3
TM9SF4Q92544 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TM9SF4Q92544 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.95■□□□□ 0.3
TM9SF4Q92544 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.95■□□□□ 0.3
TM9SF4Q92544 AL160237.2-201ENST00000556165 472 ntBASIC16.95■□□□□ 0.3
TM9SF4Q92544 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TM9SF4Q92544 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.95■□□□□ 0.3
TM9SF4Q92544 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM9SF4Q92544 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.95■□□□□ 0.3
TM9SF4Q92544 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.95■□□□□ 0.3
TM9SF4Q92544 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.95■□□□□ 0.3
TM9SF4Q92544 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM9SF4Q92544 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.95■□□□□ 0.3
TM9SF4Q92544 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.95■□□□□ 0.3
TM9SF4Q92544 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM9SF4Q92544 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TM9SF4Q92544 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.95■□□□□ 0.3
TM9SF4Q92544 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.95■□□□□ 0.3
TM9SF4Q92544 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TM9SF4Q92544 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TM9SF4Q92544 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
TM9SF4Q92544 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TM9SF4Q92544 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TM9SF4Q92544 KRT89P-201ENST00000620027 1478 ntBASIC16.94■□□□□ 0.3
TM9SF4Q92544 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.94■□□□□ 0.3
TM9SF4Q92544 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TM9SF4Q92544 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TM9SF4Q92544 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TM9SF4Q92544 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.94■□□□□ 0.3
TM9SF4Q92544 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TM9SF4Q92544 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TM9SF4Q92544 EMBP1-201ENST00000458200 901 ntBASIC16.94■□□□□ 0.3
TM9SF4Q92544 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.94■□□□□ 0.3
TM9SF4Q92544 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.94■□□□□ 0.3
TM9SF4Q92544 AL662844.1-201ENST00000546340 181 ntBASIC16.94■□□□□ 0.3
TM9SF4Q92544 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.94■□□□□ 0.3
TM9SF4Q92544 AC008687.5-201ENST00000593746 558 ntBASIC16.94■□□□□ 0.3
TM9SF4Q92544 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TM9SF4Q92544 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TM9SF4Q92544 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.94■□□□□ 0.3
TM9SF4Q92544 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TM9SF4Q92544 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
TM9SF4Q92544 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TM9SF4Q92544 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TM9SF4Q92544 AC126763.1-201ENST00000552015 2118 ntBASIC16.94■□□□□ 0.3
TM9SF4Q92544 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TM9SF4Q92544 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.94■□□□□ 0.3
TM9SF4Q92544 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TM9SF4Q92544 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TM9SF4Q92544 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TM9SF4Q92544 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TM9SF4Q92544 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TM9SF4Q92544 AC073592.3-201ENST00000625118 1834 ntBASIC16.93■□□□□ 0.3
TM9SF4Q92544 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.93■□□□□ 0.3
TM9SF4Q92544 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TM9SF4Q92544 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.93■□□□□ 0.3
TM9SF4Q92544 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TM9SF4Q92544 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TM9SF4Q92544 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TM9SF4Q92544 AC233702.3-201ENST00000578656 1387 ntBASIC16.93■□□□□ 0.3
TM9SF4Q92544 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TM9SF4Q92544 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TM9SF4Q92544 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.93■□□□□ 0.3
TM9SF4Q92544 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TM9SF4Q92544 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.93■□□□□ 0.3
TM9SF4Q92544 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
TM9SF4Q92544 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TM9SF4Q92544 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TM9SF4Q92544 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
TM9SF4Q92544 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.93■□□□□ 0.3
TM9SF4Q92544 AC099336.1-202ENST00000602961 463 ntBASIC16.93■□□□□ 0.3
TM9SF4Q92544 AC138894.3-201ENST00000603787 634 ntBASIC16.93■□□□□ 0.3
TM9SF4Q92544 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.93■□□□□ 0.3
TM9SF4Q92544 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TM9SF4Q92544 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TM9SF4Q92544 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.93■□□□□ 0.3
TM9SF4Q92544 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TM9SF4Q92544 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TM9SF4Q92544 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TM9SF4Q92544 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TM9SF4Q92544 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TM9SF4Q92544 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TM9SF4Q92544 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TM9SF4Q92544 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TM9SF4Q92544 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.92■□□□□ 0.3
TM9SF4Q92544 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TM9SF4Q92544 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TM9SF4Q92544 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TM9SF4Q92544 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TM9SF4Q92544 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms