Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 HNRNPA1P28-201ENST00000424481 961 ntBASIC23.41■■□□□ 1.34
RAPGEF4Q8WZA2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC23.41■■□□□ 1.34
RAPGEF4Q8WZA2 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RAPGEF4Q8WZA2 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC23.41■■□□□ 1.34
RAPGEF4Q8WZA2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC23.41■■□□□ 1.34
RAPGEF4Q8WZA2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC23.41■■□□□ 1.34
RAPGEF4Q8WZA2 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC23.41■■□□□ 1.34
RAPGEF4Q8WZA2 MTDHP5-201ENST00000598980 586 ntBASIC23.41■■□□□ 1.34
RAPGEF4Q8WZA2 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
RAPGEF4Q8WZA2 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RAPGEF4Q8WZA2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RAPGEF4Q8WZA2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
RAPGEF4Q8WZA2 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
RAPGEF4Q8WZA2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
RAPGEF4Q8WZA2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RAPGEF4Q8WZA2 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RAPGEF4Q8WZA2 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RAPGEF4Q8WZA2 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RAPGEF4Q8WZA2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RAPGEF4Q8WZA2 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
RAPGEF4Q8WZA2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
RAPGEF4Q8WZA2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
RAPGEF4Q8WZA2 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RAPGEF4Q8WZA2 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC23.4■■□□□ 1.34
RAPGEF4Q8WZA2 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC23.4■■□□□ 1.34
RAPGEF4Q8WZA2 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
RAPGEF4Q8WZA2 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RAPGEF4Q8WZA2 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
RAPGEF4Q8WZA2 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RAPGEF4Q8WZA2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
RAPGEF4Q8WZA2 AL020989.1-201ENST00000422979 469 ntBASIC23.4■■□□□ 1.34
RAPGEF4Q8WZA2 PMS2P2-201ENST00000425039 1128 ntBASIC23.4■■□□□ 1.34
RAPGEF4Q8WZA2 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC23.4■■□□□ 1.34
RAPGEF4Q8WZA2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC23.4■■□□□ 1.34
RAPGEF4Q8WZA2 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC23.4■■□□□ 1.34
RAPGEF4Q8WZA2 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC23.4■■□□□ 1.34
RAPGEF4Q8WZA2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC23.4■■□□□ 1.34
RAPGEF4Q8WZA2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RAPGEF4Q8WZA2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC23.4■■□□□ 1.34
RAPGEF4Q8WZA2 ADM-208ENST00000534464 1640 ntTSL 2 BASIC23.4■■□□□ 1.34
RAPGEF4Q8WZA2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
RAPGEF4Q8WZA2 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RAPGEF4Q8WZA2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RAPGEF4Q8WZA2 SIRPAP1-201ENST00000448467 1770 ntBASIC23.4■■□□□ 1.34
RAPGEF4Q8WZA2 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.34
RAPGEF4Q8WZA2 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
RAPGEF4Q8WZA2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC23.39■■□□□ 1.34
RAPGEF4Q8WZA2 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
RAPGEF4Q8WZA2 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
RAPGEF4Q8WZA2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC23.39■■□□□ 1.34
RAPGEF4Q8WZA2 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
RAPGEF4Q8WZA2 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC23.39■■□□□ 1.33
RAPGEF4Q8WZA2 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC23.39■■□□□ 1.33
RAPGEF4Q8WZA2 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC23.39■■□□□ 1.33
RAPGEF4Q8WZA2 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC23.39■■□□□ 1.33
RAPGEF4Q8WZA2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC23.39■■□□□ 1.33
RAPGEF4Q8WZA2 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC23.39■■□□□ 1.33
RAPGEF4Q8WZA2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC23.39■■□□□ 1.33
RAPGEF4Q8WZA2 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC23.39■■□□□ 1.33
RAPGEF4Q8WZA2 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RAPGEF4Q8WZA2 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC23.39■■□□□ 1.33
RAPGEF4Q8WZA2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RAPGEF4Q8WZA2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RAPGEF4Q8WZA2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RAPGEF4Q8WZA2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC23.39■■□□□ 1.33
RAPGEF4Q8WZA2 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
RAPGEF4Q8WZA2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC23.38■■□□□ 1.33
RAPGEF4Q8WZA2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC23.38■■□□□ 1.33
RAPGEF4Q8WZA2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
RAPGEF4Q8WZA2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RAPGEF4Q8WZA2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RAPGEF4Q8WZA2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RAPGEF4Q8WZA2 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC23.38■■□□□ 1.33
RAPGEF4Q8WZA2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC23.38■■□□□ 1.33
RAPGEF4Q8WZA2 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RAPGEF4Q8WZA2 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC23.38■■□□□ 1.33
RAPGEF4Q8WZA2 AC004706.3-202ENST00000621574 984 ntBASIC23.38■■□□□ 1.33
RAPGEF4Q8WZA2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC23.38■■□□□ 1.33
RAPGEF4Q8WZA2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RAPGEF4Q8WZA2 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
RAPGEF4Q8WZA2 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RAPGEF4Q8WZA2 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RAPGEF4Q8WZA2 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
RAPGEF4Q8WZA2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC23.38■■□□□ 1.33
RAPGEF4Q8WZA2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RAPGEF4Q8WZA2 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RAPGEF4Q8WZA2 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RAPGEF4Q8WZA2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RAPGEF4Q8WZA2 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RAPGEF4Q8WZA2 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RAPGEF4Q8WZA2 AL353593.2-201ENST00000602529 1483 ntBASIC23.37■■□□□ 1.33
RAPGEF4Q8WZA2 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
RAPGEF4Q8WZA2 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC23.37■■□□□ 1.33
RAPGEF4Q8WZA2 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RAPGEF4Q8WZA2 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RAPGEF4Q8WZA2 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC23.37■■□□□ 1.33
RAPGEF4Q8WZA2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RAPGEF4Q8WZA2 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
RAPGEF4Q8WZA2 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RAPGEF4Q8WZA2 SP100-208ENST00000427101 1922 ntTSL 2 BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms