Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SH3RF2Q8TEC5 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.58■□□□□ 0.56
SH3RF2Q8TEC5 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SH3RF2Q8TEC5 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
SH3RF2Q8TEC5 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SH3RF2Q8TEC5 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SH3RF2Q8TEC5 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SH3RF2Q8TEC5 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SH3RF2Q8TEC5 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
SH3RF2Q8TEC5 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SH3RF2Q8TEC5 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.57■□□□□ 0.56
SH3RF2Q8TEC5 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.57■□□□□ 0.56
SH3RF2Q8TEC5 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SH3RF2Q8TEC5 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SH3RF2Q8TEC5 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SH3RF2Q8TEC5 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.57■□□□□ 0.56
SH3RF2Q8TEC5 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
SH3RF2Q8TEC5 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.57■□□□□ 0.56
SH3RF2Q8TEC5 AL031284.1-201ENST00000419297 478 ntBASIC18.57■□□□□ 0.56
SH3RF2Q8TEC5 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SH3RF2Q8TEC5 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SH3RF2Q8TEC5 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.57■□□□□ 0.56
SH3RF2Q8TEC5 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.57■□□□□ 0.56
SH3RF2Q8TEC5 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.57■□□□□ 0.56
SH3RF2Q8TEC5 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SH3RF2Q8TEC5 AC090164.3-201ENST00000610780 2143 ntBASIC18.57■□□□□ 0.56
SH3RF2Q8TEC5 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SH3RF2Q8TEC5 BX640515.1-201ENST00000617215 977 ntBASIC18.57■□□□□ 0.56
SH3RF2Q8TEC5 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SH3RF2Q8TEC5 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SH3RF2Q8TEC5 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.57■□□□□ 0.56
SH3RF2Q8TEC5 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SH3RF2Q8TEC5 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.57■□□□□ 0.56
SH3RF2Q8TEC5 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SH3RF2Q8TEC5 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SH3RF2Q8TEC5 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SH3RF2Q8TEC5 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.56■□□□□ 0.56
SH3RF2Q8TEC5 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SH3RF2Q8TEC5 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.56■□□□□ 0.56
SH3RF2Q8TEC5 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.56■□□□□ 0.56
SH3RF2Q8TEC5 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.56■□□□□ 0.56
SH3RF2Q8TEC5 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.56■□□□□ 0.56
SH3RF2Q8TEC5 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SH3RF2Q8TEC5 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SH3RF2Q8TEC5 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SH3RF2Q8TEC5 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SH3RF2Q8TEC5 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SH3RF2Q8TEC5 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SH3RF2Q8TEC5 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.56■□□□□ 0.56
SH3RF2Q8TEC5 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.56■□□□□ 0.56
SH3RF2Q8TEC5 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.56■□□□□ 0.56
SH3RF2Q8TEC5 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.56■□□□□ 0.56
SH3RF2Q8TEC5 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SH3RF2Q8TEC5 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SH3RF2Q8TEC5 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SH3RF2Q8TEC5 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SH3RF2Q8TEC5 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SH3RF2Q8TEC5 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SH3RF2Q8TEC5 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.56■□□□□ 0.56
SH3RF2Q8TEC5 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SH3RF2Q8TEC5 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.56■□□□□ 0.56
SH3RF2Q8TEC5 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SH3RF2Q8TEC5 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SH3RF2Q8TEC5 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 RNPS1P1-201ENST00000507437 918 ntBASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 AC073648.2-201ENST00000510116 352 ntBASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 AC073592.3-201ENST00000625118 1834 ntBASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SH3RF2Q8TEC5 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms