Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AL671277.2-201ENST00000458060 996 ntBASIC18.53■□□□□ 0.56
PCDH19Q8TAB3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH19Q8TAB3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH19Q8TAB3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.53■□□□□ 0.56
PCDH19Q8TAB3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDH19Q8TAB3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDH19Q8TAB3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDH19Q8TAB3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDH19Q8TAB3 AC009154.2-201ENST00000621177 724 ntBASIC18.53■□□□□ 0.56
PCDH19Q8TAB3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDH19Q8TAB3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDH19Q8TAB3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH19Q8TAB3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH19Q8TAB3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH19Q8TAB3 AL353692.3-201ENST00000407031 1396 ntBASIC18.53■□□□□ 0.56
PCDH19Q8TAB3 KRT8P47-201ENST00000604727 1398 ntBASIC18.53■□□□□ 0.56
PCDH19Q8TAB3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH19Q8TAB3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH19Q8TAB3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH19Q8TAB3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH19Q8TAB3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH19Q8TAB3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH19Q8TAB3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDH19Q8TAB3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH19Q8TAB3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDH19Q8TAB3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH19Q8TAB3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH19Q8TAB3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH19Q8TAB3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH19Q8TAB3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PCDH19Q8TAB3 TSPY12P-201ENST00000421279 868 ntBASIC18.52■□□□□ 0.56
PCDH19Q8TAB3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDH19Q8TAB3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.52■□□□□ 0.56
PCDH19Q8TAB3 AC005332.3-201ENST00000589904 676 ntBASIC18.52■□□□□ 0.56
PCDH19Q8TAB3 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.52■□□□□ 0.56
PCDH19Q8TAB3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PCDH19Q8TAB3 GPR32P1-201ENST00000601788 811 ntBASIC18.52■□□□□ 0.56
PCDH19Q8TAB3 AL121956.5-201ENST00000625261 221 ntBASIC18.52■□□□□ 0.56
PCDH19Q8TAB3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDH19Q8TAB3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDH19Q8TAB3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH19Q8TAB3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH19Q8TAB3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
PCDH19Q8TAB3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDH19Q8TAB3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDH19Q8TAB3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PCDH19Q8TAB3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
PCDH19Q8TAB3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDH19Q8TAB3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDH19Q8TAB3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.55
PCDH19Q8TAB3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDH19Q8TAB3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDH19Q8TAB3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PCDH19Q8TAB3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH19Q8TAB3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PCDH19Q8TAB3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH19Q8TAB3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH19Q8TAB3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PCDH19Q8TAB3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH19Q8TAB3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH19Q8TAB3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDH19Q8TAB3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDH19Q8TAB3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDH19Q8TAB3 AL390719.2-201ENST00000606993 987 ntBASIC18.51■□□□□ 0.55
PCDH19Q8TAB3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDH19Q8TAB3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH19Q8TAB3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH19Q8TAB3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH19Q8TAB3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDH19Q8TAB3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH19Q8TAB3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH19Q8TAB3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDH19Q8TAB3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH19Q8TAB3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH19Q8TAB3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH19Q8TAB3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH19Q8TAB3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH19Q8TAB3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
PCDH19Q8TAB3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PCDH19Q8TAB3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH19Q8TAB3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH19Q8TAB3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH19Q8TAB3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.5■□□□□ 0.55
PCDH19Q8TAB3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDH19Q8TAB3 AP000550.4-202ENST00000639755 178 ntBASIC18.5■□□□□ 0.55
PCDH19Q8TAB3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH19Q8TAB3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH19Q8TAB3 AC009949.1-201ENST00000623048 1830 ntBASIC18.5■□□□□ 0.55
PCDH19Q8TAB3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
PCDH19Q8TAB3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH19Q8TAB3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDH19Q8TAB3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH19Q8TAB3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PCDH19Q8TAB3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH19Q8TAB3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH19Q8TAB3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH19Q8TAB3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH19Q8TAB3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH19Q8TAB3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDH19Q8TAB3 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms