Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPSF7Q8N684 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.56■□□□□ 0.4
CPSF7Q8N684 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.56■□□□□ 0.4
CPSF7Q8N684 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPSF7Q8N684 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPSF7Q8N684 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPSF7Q8N684 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPSF7Q8N684 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPSF7Q8N684 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.55■□□□□ 0.4
CPSF7Q8N684 GPAT2P1-201ENST00000444924 1672 ntBASIC17.55■□□□□ 0.4
CPSF7Q8N684 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPSF7Q8N684 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CPSF7Q8N684 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPSF7Q8N684 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPSF7Q8N684 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CPSF7Q8N684 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.55■□□□□ 0.4
CPSF7Q8N684 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPSF7Q8N684 ARMC10P1-201ENST00000313754 855 ntBASIC17.55■□□□□ 0.4
CPSF7Q8N684 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CPSF7Q8N684 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.55■□□□□ 0.4
CPSF7Q8N684 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.55■□□□□ 0.4
CPSF7Q8N684 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPSF7Q8N684 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
CPSF7Q8N684 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.55■□□□□ 0.4
CPSF7Q8N684 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.55■□□□□ 0.4
CPSF7Q8N684 AL590326.2-201ENST00000625139 305 ntBASIC17.55■□□□□ 0.4
CPSF7Q8N684 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CPSF7Q8N684 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.55■□□□□ 0.4
CPSF7Q8N684 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
CPSF7Q8N684 AC116562.4-202ENST00000641738 218 ntBASIC17.55■□□□□ 0.4
CPSF7Q8N684 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.55■□□□□ 0.4
CPSF7Q8N684 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CPSF7Q8N684 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.55■□□□□ 0.4
CPSF7Q8N684 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CPSF7Q8N684 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.55■□□□□ 0.4
CPSF7Q8N684 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CPSF7Q8N684 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.55■□□□□ 0.4
CPSF7Q8N684 AC106820.2-201ENST00000563775 3264 ntBASIC17.55■□□□□ 0.4
CPSF7Q8N684 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CPSF7Q8N684 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CPSF7Q8N684 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPSF7Q8N684 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPSF7Q8N684 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPSF7Q8N684 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPSF7Q8N684 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
CPSF7Q8N684 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.54■□□□□ 0.4
CPSF7Q8N684 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.54■□□□□ 0.4
CPSF7Q8N684 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPSF7Q8N684 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPSF7Q8N684 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPSF7Q8N684 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPSF7Q8N684 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPSF7Q8N684 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPSF7Q8N684 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPSF7Q8N684 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CPSF7Q8N684 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.54■□□□□ 0.4
CPSF7Q8N684 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.54■□□□□ 0.4
CPSF7Q8N684 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.54■□□□□ 0.4
CPSF7Q8N684 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPSF7Q8N684 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CPSF7Q8N684 CCR12P-201ENST00000446203 998 ntBASIC17.54■□□□□ 0.4
CPSF7Q8N684 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.54■□□□□ 0.4
CPSF7Q8N684 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
CPSF7Q8N684 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.54■□□□□ 0.4
CPSF7Q8N684 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.54■□□□□ 0.4
CPSF7Q8N684 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.54■□□□□ 0.4
CPSF7Q8N684 AL355312.1-201ENST00000407115 2176 ntBASIC17.54■□□□□ 0.4
CPSF7Q8N684 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPSF7Q8N684 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPSF7Q8N684 NKILA-202ENST00000614771 2598 ntBASIC17.54■□□□□ 0.4
CPSF7Q8N684 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPSF7Q8N684 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPSF7Q8N684 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.54■□□□□ 0.4
CPSF7Q8N684 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPSF7Q8N684 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.54■□□□□ 0.4
CPSF7Q8N684 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPSF7Q8N684 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPSF7Q8N684 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPSF7Q8N684 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPSF7Q8N684 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
CPSF7Q8N684 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPSF7Q8N684 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CPSF7Q8N684 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CPSF7Q8N684 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPSF7Q8N684 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPSF7Q8N684 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.53■□□□□ 0.4
CPSF7Q8N684 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPSF7Q8N684 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPSF7Q8N684 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CPSF7Q8N684 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPSF7Q8N684 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPSF7Q8N684 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.53■□□□□ 0.4
CPSF7Q8N684 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPSF7Q8N684 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPSF7Q8N684 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.53■□□□□ 0.4
CPSF7Q8N684 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPSF7Q8N684 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPSF7Q8N684 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CPSF7Q8N684 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPSF7Q8N684 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms