Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 FGF14-AS2-201ENST00000606448 1074 ntBASIC22.18■■□□□ 1.14
SMC5Q8IY18 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
SMC5Q8IY18 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
SMC5Q8IY18 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
SMC5Q8IY18 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
SMC5Q8IY18 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC22.18■■□□□ 1.14
SMC5Q8IY18 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC22.18■■□□□ 1.14
SMC5Q8IY18 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
SMC5Q8IY18 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SMC5Q8IY18 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SMC5Q8IY18 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC22.17■■□□□ 1.14
SMC5Q8IY18 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SMC5Q8IY18 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SMC5Q8IY18 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SMC5Q8IY18 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
SMC5Q8IY18 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
SMC5Q8IY18 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SMC5Q8IY18 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SMC5Q8IY18 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SMC5Q8IY18 DDT-203ENST00000403754 569 ntTSL 3 BASIC22.17■■□□□ 1.14
SMC5Q8IY18 DDT-206ENST00000430101 573 ntTSL 2 BASIC22.17■■□□□ 1.14
SMC5Q8IY18 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC22.17■■□□□ 1.14
SMC5Q8IY18 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC22.17■■□□□ 1.14
SMC5Q8IY18 AP003733.1-201ENST00000491725 852 ntBASIC22.17■■□□□ 1.14
SMC5Q8IY18 VENTXP5-201ENST00000523979 775 ntBASIC22.17■■□□□ 1.14
SMC5Q8IY18 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC22.17■■□□□ 1.14
SMC5Q8IY18 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC22.17■■□□□ 1.14
SMC5Q8IY18 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC22.17■■□□□ 1.14
SMC5Q8IY18 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC22.17■■□□□ 1.14
SMC5Q8IY18 SPEG-225ENST00000617028 815 ntTSL 5 BASIC22.17■■□□□ 1.14
SMC5Q8IY18 WDR6-223ENST00000627177 207 ntTSL 2 BASIC22.17■■□□□ 1.14
SMC5Q8IY18 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SMC5Q8IY18 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SMC5Q8IY18 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC22.17■■□□□ 1.14
SMC5Q8IY18 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC22.17■■□□□ 1.14
SMC5Q8IY18 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC22.17■■□□□ 1.14
SMC5Q8IY18 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC22.17■■□□□ 1.14
SMC5Q8IY18 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
SMC5Q8IY18 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC22.16■■□□□ 1.14
SMC5Q8IY18 CROCCP2-202ENST00000412962 2773 ntBASIC22.16■■□□□ 1.14
SMC5Q8IY18 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
SMC5Q8IY18 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SMC5Q8IY18 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC22.16■■□□□ 1.14
SMC5Q8IY18 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC22.16■■□□□ 1.14
SMC5Q8IY18 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
SMC5Q8IY18 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
SMC5Q8IY18 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SMC5Q8IY18 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
SMC5Q8IY18 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC22.16■■□□□ 1.14
SMC5Q8IY18 AC104076.2-201ENST00000448912 469 ntBASIC22.16■■□□□ 1.14
SMC5Q8IY18 AC068472.1-201ENST00000474589 881 ntBASIC22.16■■□□□ 1.14
SMC5Q8IY18 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SMC5Q8IY18 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC22.16■■□□□ 1.14
SMC5Q8IY18 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SMC5Q8IY18 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC22.16■■□□□ 1.14
SMC5Q8IY18 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC22.16■■□□□ 1.14
SMC5Q8IY18 GPR32P1-201ENST00000601788 811 ntBASIC22.16■■□□□ 1.14
SMC5Q8IY18 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC22.16■■□□□ 1.14
SMC5Q8IY18 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SMC5Q8IY18 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC22.16■■□□□ 1.14
SMC5Q8IY18 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SMC5Q8IY18 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SMC5Q8IY18 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
SMC5Q8IY18 AL023806.1-201ENST00000603994 1649 ntBASIC22.16■■□□□ 1.14
SMC5Q8IY18 AC080080.1-201ENST00000625121 2420 ntBASIC22.16■■□□□ 1.14
SMC5Q8IY18 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SMC5Q8IY18 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SMC5Q8IY18 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
SMC5Q8IY18 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC22.15■■□□□ 1.14
SMC5Q8IY18 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC22.15■■□□□ 1.14
SMC5Q8IY18 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SMC5Q8IY18 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SMC5Q8IY18 TPR-209ENST00000613151 2478 ntTSL 5 BASIC22.15■■□□□ 1.14
SMC5Q8IY18 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC22.15■■□□□ 1.14
SMC5Q8IY18 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC22.15■■□□□ 1.14
SMC5Q8IY18 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SMC5Q8IY18 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SMC5Q8IY18 AC112907.2-201ENST00000448639 330 ntBASIC22.15■■□□□ 1.14
SMC5Q8IY18 AL359075.1-203ENST00000462729 1002 ntBASIC22.15■■□□□ 1.14
SMC5Q8IY18 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
SMC5Q8IY18 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC22.15■■□□□ 1.14
SMC5Q8IY18 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SMC5Q8IY18 AL390719.2-201ENST00000606993 987 ntBASIC22.15■■□□□ 1.14
SMC5Q8IY18 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SMC5Q8IY18 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SMC5Q8IY18 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SMC5Q8IY18 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SMC5Q8IY18 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC22.15■■□□□ 1.14
SMC5Q8IY18 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC22.15■■□□□ 1.14
SMC5Q8IY18 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
SMC5Q8IY18 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SMC5Q8IY18 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SMC5Q8IY18 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
SMC5Q8IY18 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SMC5Q8IY18 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SMC5Q8IY18 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC22.14■■□□□ 1.14
SMC5Q8IY18 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
SMC5Q8IY18 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC22.14■■□□□ 1.14
SMC5Q8IY18 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SMC5Q8IY18 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms