Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCUBE3Q8IX30 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SCUBE3Q8IX30 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCUBE3Q8IX30 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.87■□□□□ 0.61
SCUBE3Q8IX30 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SCUBE3Q8IX30 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SCUBE3Q8IX30 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SCUBE3Q8IX30 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCUBE3Q8IX30 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCUBE3Q8IX30 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SCUBE3Q8IX30 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCUBE3Q8IX30 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.87■□□□□ 0.61
SCUBE3Q8IX30 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SCUBE3Q8IX30 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.87■□□□□ 0.61
SCUBE3Q8IX30 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SCUBE3Q8IX30 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.87■□□□□ 0.61
SCUBE3Q8IX30 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.87■□□□□ 0.61
SCUBE3Q8IX30 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCUBE3Q8IX30 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.87■□□□□ 0.61
SCUBE3Q8IX30 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCUBE3Q8IX30 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCUBE3Q8IX30 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SCUBE3Q8IX30 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCUBE3Q8IX30 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCUBE3Q8IX30 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCUBE3Q8IX30 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.86■□□□□ 0.61
SCUBE3Q8IX30 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCUBE3Q8IX30 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
SCUBE3Q8IX30 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCUBE3Q8IX30 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SCUBE3Q8IX30 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCUBE3Q8IX30 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
SCUBE3Q8IX30 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCUBE3Q8IX30 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCUBE3Q8IX30 AL845331.1-201ENST00000424978 1190 ntBASIC18.86■□□□□ 0.61
SCUBE3Q8IX30 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.86■□□□□ 0.61
SCUBE3Q8IX30 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.86■□□□□ 0.61
SCUBE3Q8IX30 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.86■□□□□ 0.61
SCUBE3Q8IX30 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.86■□□□□ 0.61
SCUBE3Q8IX30 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.86■□□□□ 0.61
SCUBE3Q8IX30 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCUBE3Q8IX30 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SCUBE3Q8IX30 AP002414.4-201ENST00000589764 1148 ntBASIC18.86■□□□□ 0.61
SCUBE3Q8IX30 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCUBE3Q8IX30 NPAP1P7-201ENST00000613027 823 ntBASIC18.86■□□□□ 0.61
SCUBE3Q8IX30 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCUBE3Q8IX30 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCUBE3Q8IX30 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCUBE3Q8IX30 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
SCUBE3Q8IX30 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SCUBE3Q8IX30 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCUBE3Q8IX30 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.86■□□□□ 0.61
SCUBE3Q8IX30 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.85■□□□□ 0.61
SCUBE3Q8IX30 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCUBE3Q8IX30 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCUBE3Q8IX30 KRT18P55-202ENST00000578578 1546 ntBASIC18.85■□□□□ 0.61
SCUBE3Q8IX30 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCUBE3Q8IX30 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.85■□□□□ 0.61
SCUBE3Q8IX30 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.85■□□□□ 0.61
SCUBE3Q8IX30 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCUBE3Q8IX30 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
SCUBE3Q8IX30 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCUBE3Q8IX30 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SCUBE3Q8IX30 AL450487.1-201ENST00000426799 995 ntBASIC18.85■□□□□ 0.61
SCUBE3Q8IX30 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.85■□□□□ 0.61
SCUBE3Q8IX30 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.85■□□□□ 0.61
SCUBE3Q8IX30 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.85■□□□□ 0.61
SCUBE3Q8IX30 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
SCUBE3Q8IX30 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.85■□□□□ 0.61
SCUBE3Q8IX30 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.85■□□□□ 0.61
SCUBE3Q8IX30 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.85■□□□□ 0.61
SCUBE3Q8IX30 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.85■□□□□ 0.61
SCUBE3Q8IX30 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
SCUBE3Q8IX30 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.85■□□□□ 0.61
SCUBE3Q8IX30 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.85■□□□□ 0.61
SCUBE3Q8IX30 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.85■□□□□ 0.61
SCUBE3Q8IX30 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.85■□□□□ 0.61
SCUBE3Q8IX30 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCUBE3Q8IX30 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.85■□□□□ 0.61
SCUBE3Q8IX30 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCUBE3Q8IX30 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
SCUBE3Q8IX30 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SCUBE3Q8IX30 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCUBE3Q8IX30 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.85■□□□□ 0.61
SCUBE3Q8IX30 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCUBE3Q8IX30 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SCUBE3Q8IX30 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCUBE3Q8IX30 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCUBE3Q8IX30 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCUBE3Q8IX30 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCUBE3Q8IX30 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCUBE3Q8IX30 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SCUBE3Q8IX30 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.84■□□□□ 0.61
SCUBE3Q8IX30 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.84■□□□□ 0.61
SCUBE3Q8IX30 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCUBE3Q8IX30 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
SCUBE3Q8IX30 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.84■□□□□ 0.61
SCUBE3Q8IX30 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
SCUBE3Q8IX30 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCUBE3Q8IX30 AC011840.4-201ENST00000578471 627 ntBASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms