Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 AL354751.1-201ENST00000412768 1863 ntBASIC17.15■□□□□ 0.34
RAB43Q86YS6 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB43Q86YS6 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB43Q86YS6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB43Q86YS6 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB43Q86YS6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RAB43Q86YS6 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
RAB43Q86YS6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.15■□□□□ 0.34
RAB43Q86YS6 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
RAB43Q86YS6 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB43Q86YS6 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.15■□□□□ 0.34
RAB43Q86YS6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB43Q86YS6 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB43Q86YS6 AC233702.3-201ENST00000578656 1387 ntBASIC17.15■□□□□ 0.34
RAB43Q86YS6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
RAB43Q86YS6 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
RAB43Q86YS6 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RAB43Q86YS6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB43Q86YS6 PKD1P1-201ENST00000458669 6805 ntBASIC17.14■□□□□ 0.33
RAB43Q86YS6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB43Q86YS6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB43Q86YS6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB43Q86YS6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RAB43Q86YS6 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB43Q86YS6 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB43Q86YS6 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.14■□□□□ 0.33
RAB43Q86YS6 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RAB43Q86YS6 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.14■□□□□ 0.33
RAB43Q86YS6 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB43Q86YS6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB43Q86YS6 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB43Q86YS6 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB43Q86YS6 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.14■□□□□ 0.33
RAB43Q86YS6 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.14■□□□□ 0.33
RAB43Q86YS6 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.14■□□□□ 0.33
RAB43Q86YS6 AC124864.1-201ENST00000623408 392 ntBASIC17.14■□□□□ 0.33
RAB43Q86YS6 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB43Q86YS6 MTMR9LP-203ENST00000426597 1545 ntBASIC17.14■□□□□ 0.33
RAB43Q86YS6 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB43Q86YS6 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB43Q86YS6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB43Q86YS6 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB43Q86YS6 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB43Q86YS6 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RAB43Q86YS6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.14■□□□□ 0.33
RAB43Q86YS6 AL353692.3-201ENST00000407031 1396 ntBASIC17.14■□□□□ 0.33
RAB43Q86YS6 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB43Q86YS6 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.14■□□□□ 0.33
RAB43Q86YS6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB43Q86YS6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB43Q86YS6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.13■□□□□ 0.33
RAB43Q86YS6 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB43Q86YS6 BICD1-207ENST00000551848 1962 ntBASIC17.13■□□□□ 0.33
RAB43Q86YS6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.13■□□□□ 0.33
RAB43Q86YS6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
RAB43Q86YS6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB43Q86YS6 AL163051.1-201ENST00000569214 1512 ntBASIC17.13■□□□□ 0.33
RAB43Q86YS6 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RAB43Q86YS6 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB43Q86YS6 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB43Q86YS6 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB43Q86YS6 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB43Q86YS6 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.13■□□□□ 0.33
RAB43Q86YS6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB43Q86YS6 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB43Q86YS6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RAB43Q86YS6 UNC93B7-201ENST00000509439 705 ntBASIC17.13■□□□□ 0.33
RAB43Q86YS6 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB43Q86YS6 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.13■□□□□ 0.33
RAB43Q86YS6 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
RAB43Q86YS6 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.13■□□□□ 0.33
RAB43Q86YS6 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.13■□□□□ 0.33
RAB43Q86YS6 AL732292.2-201ENST00000609649 430 ntBASIC17.13■□□□□ 0.33
RAB43Q86YS6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB43Q86YS6 AC083906.6-201ENST00000641366 219 ntBASIC17.13■□□□□ 0.33
RAB43Q86YS6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB43Q86YS6 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB43Q86YS6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB43Q86YS6 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB43Q86YS6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB43Q86YS6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB43Q86YS6 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.13■□□□□ 0.33
RAB43Q86YS6 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB43Q86YS6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB43Q86YS6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RAB43Q86YS6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
RAB43Q86YS6 LINC00167-201ENST00000530583 1419 ntBASIC17.13■□□□□ 0.33
RAB43Q86YS6 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB43Q86YS6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB43Q86YS6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB43Q86YS6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB43Q86YS6 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB43Q86YS6 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RAB43Q86YS6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB43Q86YS6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RAB43Q86YS6 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
RAB43Q86YS6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RAB43Q86YS6 KRT17P6-201ENST00000453795 1220 ntBASIC17.12■□□□□ 0.33
RAB43Q86YS6 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB43Q86YS6 KRT18P31-201ENST00000506277 1292 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms