Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
LYSMD3Q7Z3D4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
LYSMD3Q7Z3D4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
LYSMD3Q7Z3D4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LYSMD3Q7Z3D4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LYSMD3Q7Z3D4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LYSMD3Q7Z3D4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LYSMD3Q7Z3D4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
LYSMD3Q7Z3D4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
LYSMD3Q7Z3D4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
LYSMD3Q7Z3D4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.02■□□□□ 0.48
LYSMD3Q7Z3D4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
LYSMD3Q7Z3D4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.02■□□□□ 0.48
LYSMD3Q7Z3D4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LYSMD3Q7Z3D4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.02■□□□□ 0.48
LYSMD3Q7Z3D4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LYSMD3Q7Z3D4 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LYSMD3Q7Z3D4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LYSMD3Q7Z3D4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
LYSMD3Q7Z3D4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LYSMD3Q7Z3D4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LYSMD3Q7Z3D4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.02■□□□□ 0.48
LYSMD3Q7Z3D4 GUSBP12-201ENST00000513727 720 ntBASIC18.02■□□□□ 0.48
LYSMD3Q7Z3D4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.02■□□□□ 0.48
LYSMD3Q7Z3D4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LYSMD3Q7Z3D4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.02■□□□□ 0.48
LYSMD3Q7Z3D4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.02■□□□□ 0.48
LYSMD3Q7Z3D4 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
LYSMD3Q7Z3D4 AC090616.6-201ENST00000582640 721 ntBASIC18.02■□□□□ 0.48
LYSMD3Q7Z3D4 IGHV3-41-201ENST00000613121 348 ntBASIC18.02■□□□□ 0.48
LYSMD3Q7Z3D4 AC093458.2-201ENST00000623150 629 ntBASIC18.02■□□□□ 0.48
LYSMD3Q7Z3D4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LYSMD3Q7Z3D4 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.02■□□□□ 0.48
LYSMD3Q7Z3D4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
LYSMD3Q7Z3D4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LYSMD3Q7Z3D4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LYSMD3Q7Z3D4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
LYSMD3Q7Z3D4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LYSMD3Q7Z3D4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LYSMD3Q7Z3D4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LYSMD3Q7Z3D4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 RN7SL606P-201ENST00000472779 293 ntBASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 AC124864.1-201ENST00000623408 392 ntBASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LYSMD3Q7Z3D4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
LYSMD3Q7Z3D4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18■□□□□ 0.47
LYSMD3Q7Z3D4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
LYSMD3Q7Z3D4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LYSMD3Q7Z3D4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LYSMD3Q7Z3D4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LYSMD3Q7Z3D4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
LYSMD3Q7Z3D4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
LYSMD3Q7Z3D4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LYSMD3Q7Z3D4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18■□□□□ 0.47
LYSMD3Q7Z3D4 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms