Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC011676.5-201ENST00000624864 2660 ntBASIC16.25■□□□□ 0.19
SHFQ7M4L6 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHFQ7M4L6 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.25■□□□□ 0.19
SHFQ7M4L6 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHFQ7M4L6 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHFQ7M4L6 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.25■□□□□ 0.19
SHFQ7M4L6 NKILA-202ENST00000614771 2598 ntBASIC16.25■□□□□ 0.19
SHFQ7M4L6 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHFQ7M4L6 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.24■□□□□ 0.19
SHFQ7M4L6 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.24■□□□□ 0.19
SHFQ7M4L6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
SHFQ7M4L6 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SHFQ7M4L6 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHFQ7M4L6 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHFQ7M4L6 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SHFQ7M4L6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.24■□□□□ 0.19
SHFQ7M4L6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHFQ7M4L6 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHFQ7M4L6 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SHFQ7M4L6 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SHFQ7M4L6 GCSHP5-201ENST00000443090 522 ntBASIC16.24■□□□□ 0.19
SHFQ7M4L6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SHFQ7M4L6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SHFQ7M4L6 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.24■□□□□ 0.19
SHFQ7M4L6 AC009065.1-201ENST00000564055 1225 ntBASIC16.24■□□□□ 0.19
SHFQ7M4L6 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.24■□□□□ 0.19
SHFQ7M4L6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.24■□□□□ 0.19
SHFQ7M4L6 HOXB1-202ENST00000577092 1414 ntBASIC16.24■□□□□ 0.19
SHFQ7M4L6 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHFQ7M4L6 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SHFQ7M4L6 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SHFQ7M4L6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.24■□□□□ 0.19
SHFQ7M4L6 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SHFQ7M4L6 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHFQ7M4L6 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHFQ7M4L6 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHFQ7M4L6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SHFQ7M4L6 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SHFQ7M4L6 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.24■□□□□ 0.19
SHFQ7M4L6 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHFQ7M4L6 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHFQ7M4L6 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SHFQ7M4L6 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SHFQ7M4L6 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHFQ7M4L6 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHFQ7M4L6 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHFQ7M4L6 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
SHFQ7M4L6 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHFQ7M4L6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
SHFQ7M4L6 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SHFQ7M4L6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SHFQ7M4L6 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
SHFQ7M4L6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.23■□□□□ 0.19
SHFQ7M4L6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.23■□□□□ 0.19
SHFQ7M4L6 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SHFQ7M4L6 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SHFQ7M4L6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.23■□□□□ 0.19
SHFQ7M4L6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.23■□□□□ 0.19
SHFQ7M4L6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.23■□□□□ 0.19
SHFQ7M4L6 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.23■□□□□ 0.19
SHFQ7M4L6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.23■□□□□ 0.19
SHFQ7M4L6 AC026471.5-201ENST00000615068 467 ntBASIC16.23■□□□□ 0.19
SHFQ7M4L6 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.23■□□□□ 0.19
SHFQ7M4L6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHFQ7M4L6 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHFQ7M4L6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHFQ7M4L6 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
SHFQ7M4L6 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHFQ7M4L6 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHFQ7M4L6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SHFQ7M4L6 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.23■□□□□ 0.19
SHFQ7M4L6 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHFQ7M4L6 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHFQ7M4L6 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.23■□□□□ 0.19
SHFQ7M4L6 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SHFQ7M4L6 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHFQ7M4L6 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SHFQ7M4L6 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHFQ7M4L6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SHFQ7M4L6 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHFQ7M4L6 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHFQ7M4L6 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHFQ7M4L6 LINC00602-201ENST00000629776 2065 ntBASIC16.22■□□□□ 0.19
SHFQ7M4L6 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.22■□□□□ 0.19
SHFQ7M4L6 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SHFQ7M4L6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
SHFQ7M4L6 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHFQ7M4L6 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHFQ7M4L6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.22■□□□□ 0.19
SHFQ7M4L6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SHFQ7M4L6 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHFQ7M4L6 TSPY17P-201ENST00000450329 467 ntBASIC16.22■□□□□ 0.19
SHFQ7M4L6 AC098590.1-201ENST00000468126 897 ntBASIC16.22■□□□□ 0.19
SHFQ7M4L6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.22■□□□□ 0.19
SHFQ7M4L6 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHFQ7M4L6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SHFQ7M4L6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHFQ7M4L6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.22■□□□□ 0.19
SHFQ7M4L6 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SHFQ7M4L6 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms